GO241902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SR542_SOLLC (Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.785e-30 Identity = 86/285 (30.18%), Postives = 147/285 (51.58%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIME--AMIEAMTPEERE--KPELLAESPVRRKRVAQDSGKTEQHVSQLVAQ---LFQMRVRMKNLMGVMESGSLPALSNLEDALKSDRRL---LLVPLGG 825 IVDT+GR + + A+ +E++ V P V+ V+D+ GQ A F + + I+TK+DG ++GG ALS + P+ +G GE M++ E F R+LGMGD F++K EV+ + E+ +K+ +F +Q + + +MG + +V M+PG + RE E KI M+++MT EE + P+L+ +S R R+A+ SG+ V ++ + L ++ +MK L + + G + ALS +A + L +L +GG Sbjct: 188 IVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAELMPKGRENESQAKIKRYMTMMDSMTNEELDSSNPKLMTDS--RIMRIARGSGRQVHEVMDMMEEYKRLAKIWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGG 469
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_SCHPO (Signal recognition particle 54 kDa protein homolog OS=Schizosaccharomyces pombe GN=srp54 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 6.784e-30 Identity = 88/286 (30.77%), Postives = 139/286 (48.60%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK-ITPAQVREAEKSLKIMEAMIEAMTPEEREKPELL-AESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPAL-SNLEDALKSDRRLLLVPLGGRKDQNQGG 849 IVDT+GR Q ++ + E+ ++ + P + ++++DA GQ A + F I+TKLDG ++GG ALS + PI +G GE + DLE F P ++LG+GD+ +E Q + D + M K + F DF Q + ++G +S++ MIPGM + E +K M ++++MT +E + LL E P R RVA+ SG + V + ++Q+ K + G + G L L N ALK D R L + GG Sbjct: 188 IVDTSGRHQQEQELFAEMVEISDAIRPDQTIMILDASIGQAAESQSKAFKETADFGAVIITKLDGHAKGGGALSAVAATKTPIVFIGTGEHINDLERFSPRSFISKLLGLGDLEGLMEHVQSL--DFDKKNMVKNLEQGKFTVRDFRDQLGNIMKLGPLSKMASMIPGMSNMMNGMNDEEGSLRMKRMLYIVDSMTEQELDSDGLLFVEQPSRVLRVARGSGTSVLEVEETISQVRVFAQMAKKIGG--KDGILGKLGGNPAAALKKDPRQLAAMQKRMQAMGMGG 469
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SR541_SOLLC (Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.578e-29 Identity = 86/285 (30.18%), Postives = 147/285 (51.58%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIME--AMIEAMTPEERE--KPELLAESPVRRKRVAQDSGKTEQHVSQLVAQ---LFQMRVRMKNLMGVMESGSLPALSNLEDALKSDRRL---LLVPLGG 825 IVDT+GR + + A+ +E++ V P V+ V+D+ GQ A F + + I+TK+DG ++GG ALS + P+ +G GE M++ E F R+LGMGD+ V K Q+V+ + E+ +K+ +F +Q +++ +MG + V M+PG Q RE E K M+++MT EE + P++L ES R R+A+ SG+ V +++ + L ++ +MK L + + G + +LS +A + L +L +GG Sbjct: 189 IVDTSGRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQSVAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMYEQFQSMLKMGPLG-VFSMLPGFSAEMMPQGREKESQAKFKRYMTMMDSMTDEELDSTNPKILTES--RIMRIARGSGRLVHEVMEMLEEYKRLAKIFSKMKGLK-IPKKGDMSSLSRNMNAQNMSKVLPPQMLKQIGG 469
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_DICDI (Signal recognition particle 54 kDa protein OS=Dictyostelium discoideum GN=srp54 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 4.397e-29 Identity = 71/235 (30.21%), Postives = 125/235 (53.19%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKR---VAQDSGKTEQHVSQLVAQ 696 IVDT+GR + D + +E+K ++ + P + V+D+ GQ A T F + + I+TK+DG+S GG A+S + PI +G GE + DLE F P ++LG GD+ +EK +EV+ ++ K+I F +Q + + ++G + +++ MIPGM ++ Q E LK ++++++ + EL + P+ +KR +AQ SG+ V +L+ Q Sbjct: 188 IVDTSGRHKQDSELFEEMKQIETAVKPDNCIFVMDSSIGQAAYEQATAFRSSVKVGSIIITKMDGNSMGGGAISAVAATNTPIIFIGTGEHLTDLELFDPSTFVSKLLGYGDMKGMLEKIKEVIPEDSTS--LKEIAQGKFTLRSMQQQFQQIMQLGPIDKLVQMIPGMNQLPQLQGNEGGLKLKAYINILDSLS-----EKELDGKKPITQKRIITIAQGSGRHPNEVVELLEQ 415
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SR542_ARATH (Signal recognition particle 54 kDa protein 2 OS=Arabidopsis thaliana GN=SRP-54B PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 4.397e-29 Identity = 79/284 (27.82%), Postives = 147/284 (51.76%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITP-AQVREAEKSLKIMEAMIEAMTPEERE--KPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGV--MESGSLPALSNLEDALKSDRRL---LLVPLGG 825 IVDT+GR + ++ +E++ + P V+ V+D+ GQ A F + + I+TK+DG ++GG LS + P+ +G GE M++ E F R+LG GD+ FV K QEV+ ++ E+ + + F Q + + MG + V M+PGM ++ P +E++ +K M+++MT EE + P++ ES R R+A+ SG+ + V +++ + ++ + G+ +E G++ ALS +++ + + L +L +GG Sbjct: 188 IVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMRAEMMPEGHEKESQAEIKRYMTMMDSMTNEELDSSNPKVFNES--RIMRIARGSGRIVREVMEMLEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGG 469
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_ASPNG (Signal recognition particle 54 kDa protein homolog OS=Aspergillus niger GN=srpA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 9.796e-29 Identity = 79/249 (31.73%), Postives = 130/249 (52.21%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQE-DAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKI--MEAMIEAMTPEERE-KPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMG 735 IVDT+GR + ++ + E+ ++ + P + +LV+D+ GQ A + F I+TK DG + GG A+S + PI +G GE + DLE F P ++LGMGD+ VE Q V + A+E K I + DF + ++ +MG +S++ GMIPG+ +T A + + + S+K+ M + ++MT E + ++ E P R R+A SG T + V L++Q M K + G Sbjct: 189 IVDTSGRHKQEEELFTEMTQIQTAVTPDQTILVLDSTIGQAAEAQSSAFKATADFGAIIITKTDGHAAGGGAISAVAATHTPIIYLGTGEHLMDLERFEPKAFIQKLLGMGDMAGLVEHVQAVTKDSASAKETYKHISEGIYTLRDFRENITSIMKMGPLSKLSGMIPGLSNLT-AGLDDEDGSMKLRRMIYIFDSMTAAELDGDGKMFVEQPSRMVRIACGSGTTVREVEDLLSQHRMMAGMAKRVGG 436
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SR542_HORVU (Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare GN=SRP54-2 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.182e-28 Identity = 89/306 (29.08%), Postives = 152/306 (49.67%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAM--IEAMTPEERE--KPELLAESPVRRKRVAQDSGKTEQHVSQLVAQ---LFQMRVRMKNLMGVMESGSLPALS---NLEDALKSDRRLLLVPLGGRKDQNQGGSSLTRHQQGKSSS 888 I+DT+GR + + A+ +E++ V P V+ V+D GQ A F + I+TKLDG ++GG ALS + P+ +G GE +++ E F R+LGMGD+ ++K Q+VM + E+ K+ F +Q + + +MG + +V M+PG + E E KI M +++MT E + P+L+ ES R R+A+ SG+ + V+ ++ + L +M +MK L + ++G + LS N++ K+ +L +GG G +L + GK S Sbjct: 188 IIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSELMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTES--RIIRIARGSGRQIRDVTDMLEEYKRLAKMWSKMKGLK-MPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGM----GGLQALMKQMGGKDMS 486
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SR541_HORVU (Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare GN=SRP54-1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.182e-28 Identity = 89/306 (29.08%), Postives = 152/306 (49.67%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAM--IEAMTPEERE--KPELLAESPVRRKRVAQDSGKTEQHVSQLVAQ---LFQMRVRMKNLMGVMESGSLPALS---NLEDALKSDRRLLLVPLGGRKDQNQGGSSLTRHQQGKSSS 888 I+DT+GR + + A+ +E++ V P V+ V+D GQ A F + I+TKLDG ++GG ALS + P+ +G GE +++ E F R+LGMGD+ ++K Q+VM + E+ K+ F +Q + + +MG + +V M+PG + E E KI M +++MT E + P+L+ ES R R+A+ SG+ + V+ ++ + L +M +MK L + ++G + LS N++ K+ +L +GG G +L + GK S Sbjct: 188 IIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSELMPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTES--RIIRIARGSGRQIRDVTDMLEEYKRLAKMWSKMKGLK-MPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGM----GGLQALMKQMGGKDMS 486
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_CANAL (Signal recognition particle 54 kDa protein homolog OS=Candida albicans GN=SRP54 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 4.862e-28 Identity = 77/249 (30.92%), Postives = 123/249 (49.40%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQ--KKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQV--REAEKSLKIMEAMIEAMTPEERE-KPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLM 732 IVDT+GR + ++ + E+ + + PT+ ++V+D GQ A + F ILTK+DG ++GG A+S + PI +G GE + DLE F P ++LG+GD+ +E Q + +D Q + I F DF Q +MG ++ + MIPG+ I +QV E K +K M ++++MT +E E + + P R RVA+ SG V ++ Q M K+ M Sbjct: 205 IVDTSGRHRQEEQLFTEMVQIGEAVQPTQTIMVMDGSIGQAAESQARAFKESSNFGSIILTKMDGHAKGGGAISAVAATKTPIVFIGTGEHVGDLEIFKPTTFISKLLGIGDIQGLIEHVQSLNLHQDEGHKQTIEHIKEGKFTLRDFQNQMNNFLKMGPLTNIASMIPGLSNIM-SQVGDEETSKKIKNMIYIMDSMTTKELECDGRIFIKEPSRIVRVARGSGCAVVEVEMILQQHRMMSTMAKSAM 452
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SR543_HORVU (Signal recognition particle 54 kDa protein 3 OS=Hordeum vulgare GN=SRP54-3 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 6.350e-28 Identity = 82/305 (26.89%), Postives = 150/305 (49.18%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGK--ITPAQVREAEKSLKIMEAMIEAMTPEERE--KPELLAESPVRRKRVAQDSGK-------------------TEQHVSQLVAQLFQMRVR-MKNLMGVMESGSLPALSNLEDALKSDRRLLLVPLGGRKDQNQ 843 I+DT+GR + A+ +E++ V P V+ V+D GQ A F + I+TKLDG ++GG ALS + P+ +G GE ++D + F + R+LG GD+ ++K + ++ + E+ K+ F +Q + + +MG MS++ M+PG + Q +++++ K ++++MTP E + P+L+ ES R RVA+ SG+ ++++VS+L+ Q +M + ++ ++ VM + + KS LL LGG KD ++ Sbjct: 187 IIDTSGRHMQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSASVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQFQNLLKMGPMSQIFSMLPGFSSELMPKGQEKQSKEKFKRYMTIMDSMTPAELDSTNPKLMTES--RIIRVARGSGRKVKDVMEMLEEYKRLAKMWSKRNVSKLIPQNGKMSAQAIQKMLKVMPPQVVQQMGG-----KSGLEALLKQLGGGKDTSK 484 The following BLAST results are available for this feature:
BLAST of GO241902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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