GO241875

Overview
NameGO241875
Unique NameGO241875
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241875 vs. ExPASy Swiss-Prot
Match: CATD_CHIHA (Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.383e-14
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 2
Query:    2 QYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 172
            QYILK  +    +C+SGFM  D+P P GPLWILGDVFMG Y+TVFD    R+GFA+A
Sbjct:  339 QYILKVTQAGKTMCLSGFMGLDIPAPAGPLWILGDVFMGQYYTVFDRDANRVGFAKA 395          
BLAST of GO241875 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.806e-14
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 2
Query:    2 QYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 172
            QY+LK  +G   +C+SG M  ++PPP GPLWILGDVF+G Y+TVFD    R+GFA++
Sbjct:  339 QYVLKESQGGKTICLSGLMGLEIPPPAGPLWILGDVFIGQYYTVFDRESNRVGFAKS 395          
BLAST of GO241875 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.080e-14
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 2
Query:    5 YILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 175
            Y LK  +    +C+SGFM  D+PPP GPLWILGDVF+G Y+TVFD    R+G AEAA
Sbjct:  289 YTLKVSQAGQTICLSGFMGMDIPPPGGPLWILGDVFIGRYYTVFDRDLNRVGLAEAA 345          
BLAST of GO241875 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 4.023e-14
Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 2
Query:    5 YILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 172
            Y+L+  +    +C+SGFM  D+PPP GPLWILGDVF+G Y+T FD G  R+GFA A
Sbjct:  331 YVLRVAQMGKTICLSGFMGIDIPPPNGPLWILGDVFIGKYYTEFDMGNDRVGFATA 386          
BLAST of GO241875 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.294e-12
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 2
Query:    2 QYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFA 166
            QY L+ G G   VC SGF   D+PPP GPLWILGDVF+G Y++VFD G  R+G A
Sbjct:  334 QYTLQDGGG---VCSSGFQGLDIPPPAGPLWILGDVFIGQYYSVFDRGNNRVGLA 385          
BLAST of GO241875 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 2
Query:    2 QYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAE 169
            QY+ K       +C+SGF   D+PPP GPLWILGDVF+G Y+TVFD     +GFA+
Sbjct:  341 QYVFKVSAQGETICLSGFSGLDVPPPGGPLWILGDVFIGPYYTVFDRDNDSVGFAK 396          
BLAST of GO241875 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 4.918e-12
Identity = 32/55 (58.18%), Postives = 39/55 (70.91%), Query Frame = 2
Query:    2 QYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFA 166
            QY+L+ G G    C SGF   D+ PP GPLWILGDVF+G Y++VFD G  R+GFA
Sbjct:  334 QYMLEDGGGY---CSSGFQGLDISPPSGPLWILGDVFIGQYYSVFDRGNNRVGFA 385          
BLAST of GO241875 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 6.423e-12
Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 2
Query:    5 YILKTGEGIA-EVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFA 166
            YIL+   G     C+SGFM  D+P P GPLWILGDVF+G +++VFD G  R+GFA
Sbjct:  338 YILQMSNGNGGSTCLSGFMGMDIPAPAGPLWILGDVFIGRFYSVFDHGNKRVGFA 392          
BLAST of GO241875 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.096e-11
Identity = 39/58 (67.24%), Postives = 40/58 (68.97%), Query Frame = 2
Query:    2 QYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 175
            QYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  212 QYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 265          
BLAST of GO241875 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.096e-11
Identity = 39/58 (67.24%), Postives = 40/58 (68.97%), Query Frame = 2
Query:    2 QYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 175
            QYILK   G A  CISGF A D     GPLWILGDVFM  YHTVFD G L +GFAEAA
Sbjct:  213 QYILK---GEATQCISGFTAMDATL-LGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 266          
The following BLAST results are available for this feature:
BLAST of GO241875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CATD_CHIHA1.383e-1461.40Cathepsin D OS=Chionodraco hamatus GN=ctsd PE=1 SV... [more]
CATD_CLUHA1.806e-1456.14Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1[more]
CATD_PIG3.080e-1459.65Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]
ASPP_AEDAE4.023e-1457.14Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATEA_XENLA1.294e-1260.00Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]
CATD_CHICK2.883e-1253.57Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]
CATE_RANCA4.918e-1258.18Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
ASP3_CAEEL6.423e-1256.36Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
CARDH_CYNCA1.096e-1167.24Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDG_CYNCA1.096e-1167.24Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]

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Properties
Property NameValue
Genbank description523 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 660 5, mRNA sequence.