GO241870

Overview
NameGO241870
Unique NameGO241870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A2_SCHPO (Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe GN=tef1b PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.359e-34
Identity = 68/98 (69.39%), Postives = 83/98 (84.69%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 294
            QI  GY+PVLDCHT+HIA KFAE++ KIDRRSGK++E+ PKF+K+GDA   KM+P+KPM VE F++Y PLGRFAVRDMRQTVAVGVIK+V+K  P  A
Sbjct:  350 QISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAPGAA 447          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A1_SCHPO (Elongation factor 1-alpha-A OS=Schizosaccharomyces pombe GN=tef1a PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.359e-34
Identity = 68/98 (69.39%), Postives = 83/98 (84.69%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 294
            QI  GY+PVLDCHT+HIA KFAE++ KIDRRSGK++E+ PKF+K+GDA   KM+P+KPM VE F++Y PLGRFAVRDMRQTVAVGVIK+V+K  P  A
Sbjct:  350 QISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAPGAA 447          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A_ASHGO (Elongation factor 1-alpha OS=Ashbya gossypii GN=TEF PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.775e-34
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 291
            QI  GY+PVLDCHT+HIA KF E+L K DRR+GK+LE  PKFLK GDA  VK +P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIKSV K D +G
Sbjct:  350 QISAGYSPVLDCHTAHIACKFDELLEKNDRRTGKKLEDSPKFLKAGDAAMVKFVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVVKSDKAG 446          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1AC_PORPU (Elongation factor 1-alpha C OS=Porphyra purpurea GN=TEF-C PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.775e-34
Identity = 68/97 (70.10%), Postives = 82/97 (84.54%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 291
            +I  GYAPVLDCHT+HIA KF+E++ K+DRRSGK+LE  PK +K+GDA  VKM+ +KPM VE F+ YPPLGRFAVRDMRQTVAVGVIKSV+KK+  G
Sbjct:  344 EIHAGYAPVLDCHTAHIACKFSELILKMDRRSGKKLEDSPKMIKSGDAAMVKMVASKPMCVEAFTSYPPLGRFAVRDMRQTVAVGVIKSVEKKEVEG 440          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A3_OSCTI (Elongation factor 1-alpha 3 OS=Oscheius tipulae GN=eft-3 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.775e-34
Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 291
            QI  GY PVLDCHT+HIA KFAE+  K+DRR+GK  E  PKFLK+GDAG V++IPTKP  VE+F++Y PLGRFAVRDMRQTVAVGVIKSV K D SG
Sbjct:  353 QISAGYTPVLDCHTAHIACKFAELKEKVDRRTGKSTEASPKFLKSGDAGIVELIPTKPPCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVTKDDGSG 449          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A2_RAT (Elongation factor 1-alpha 2 OS=Rattus norvegicus GN=Eef1a2 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.775e-34
Identity = 69/93 (74.19%), Postives = 81/93 (87.10%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 279
            QI  GY+PV+DCHT+HIA KFAE+  KIDRRSGK+LE  PK LK+GDA  V+M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  352 QISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A2_RABIT (Elongation factor 1-alpha 2 OS=Oryctolagus cuniculus GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.775e-34
Identity = 69/93 (74.19%), Postives = 81/93 (87.10%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 279
            QI  GY+PV+DCHT+HIA KFAE+  KIDRRSGK+LE  PK LK+GDA  V+M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  352 QISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A2_MOUSE (Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef1a2 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.775e-34
Identity = 69/93 (74.19%), Postives = 81/93 (87.10%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 279
            QI  GY+PV+DCHT+HIA KFAE+  KIDRRSGK+LE  PK LK+GDA  V+M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  352 QISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A2_HUMAN (Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.775e-34
Identity = 69/93 (74.19%), Postives = 81/93 (87.10%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 279
            QI  GY+PV+DCHT+HIA KFAE+  KIDRRSGK+LE  PK LK+GDA  V+M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  352 QISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A2_BOVIN (Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A2 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.775e-34
Identity = 69/93 (74.19%), Postives = 81/93 (87.10%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 279
            QI  GY+PV+DCHT+HIA KFAE+  KIDRRSGK+LE  PK LK+GDA  V+M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  352 QISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
The following BLAST results are available for this feature:
BLAST of GO241870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
EF1A2_SCHPO1.359e-3469.39Elongation factor 1-alpha-B/C OS=Schizosaccharomyc... [more]
EF1A1_SCHPO1.359e-3469.39Elongation factor 1-alpha-A OS=Schizosaccharomyces... [more]
EF1A_ASHGO1.775e-3472.16Elongation factor 1-alpha OS=Ashbya gossypii GN=TE... [more]
EF1AC_PORPU1.775e-3470.10Elongation factor 1-alpha C OS=Porphyra purpurea G... [more]
EF1A3_OSCTI1.775e-3472.16Elongation factor 1-alpha 3 OS=Oscheius tipulae GN... [more]
EF1A2_RAT1.775e-3474.19Elongation factor 1-alpha 2 OS=Rattus norvegicus G... [more]
EF1A2_RABIT1.775e-3474.19Elongation factor 1-alpha 2 OS=Oryctolagus cunicul... [more]
EF1A2_MOUSE1.775e-3474.19Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef... [more]
EF1A2_HUMAN1.775e-3474.19Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF... [more]
EF1A2_BOVIN1.775e-3474.19Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A... [more]

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Properties
Property NameValue
Genbank description518 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 655 5, mRNA sequence.