GO241870

Overview
NameGO241870
Unique NameGO241870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A2_DROME (Elongation factor 1-alpha 2 OS=Drosophila melanogaster GN=Ef1alpha100E PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.701e-32
Identity = 64/94 (68.09%), Postives = 78/94 (82.98%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 282
            QI NGY PVLDCHT+HIA KF+EI  K DRR+GK  E EPK +K+GDA  + ++P+KP+ VE+F E+PPLGRFAVRDMRQTVAVGVIKSV+ K+
Sbjct:  352 QIANGYTPVLDCHTAHIACKFSEIKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKSVNFKE 445          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A_ENTHI (Elongation factor 1-alpha OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.133e-31
Identity = 62/91 (68.13%), Postives = 79/91 (86.81%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEK-EPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 270
            QI  GY PVLDCHTSHIA KF E+L+KIDRR+GK +E  EP+++KNGD+  VK++PTKP+ VE F+++PPLGRFAVRDM+QTVAVGV+K+V
Sbjct:  338 QIRKGYTPVLDCHTSHIACKFEELLSKIDRRTGKSMEGGEPEYIKNGDSALVKIVPTKPLCVEEFAKFPPLGRFAVRDMKQTVAVGVVKAV 428          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A1_EUPCR (Elongation factor 1-alpha 1 OS=Euplotes crassus GN=EFA1 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.092e-31
Identity = 62/93 (66.67%), Postives = 76/93 (81.72%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 279
            +I  GY PV+DCHT+HIA KF E+LTK D+RSGK  E+ PKFLK GDAG +++ P+KP+ VETF+ Y PLGRFAVRDMRQTVAVGVI+ + KK
Sbjct:  340 EIKAGYTPVIDCHTAHIACKFEELLTKADKRSGKMTEENPKFLKAGDAGLIRLSPSKPLCVETFATYAPLGRFAVRDMRQTVAVGVIQEIKKK 432          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.981e-31
Identity = 62/94 (65.96%), Postives = 77/94 (81.91%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 282
            +I NGY+PV+DCHT+HI+ KF  I  K+D+RSGK LE+ PK +K+GDA  V M P KP+ VE F++YPPLGRFAVRDM+QTVAVGVIKSV KK+
Sbjct:  336 EIKNGYSPVVDCHTAHISCKFQTITAKMDKRSGKVLEENPKLIKSGDAALVVMQPLKPLCVEAFTDYPPLGRFAVRDMKQTVAVGVIKSVTKKE 429          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A_PLAFK (Elongation factor 1-alpha OS=Plasmodium falciparum (isolate K1 / Thailand) GN=MEF-1 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.653e-30
Identity = 59/94 (62.77%), Postives = 77/94 (81.91%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 282
            +I NGY P+LDCHTSHI+ KF  I +KID+RSGK +E+ PK +K+GD+  V + P KPMVVETF+EYPPLGRFA+RDMRQT+AVG+I  + +K+
Sbjct:  338 EIKNGYTPLLDCHTSHISCKFLNIDSKIDKRSGKVVEENPKAIKSGDSALVSLEPKKPMVVETFTEYPPLGRFAIRDMRQTIAVGIINQLKRKN 431          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A_DICDI (Elongation factor 1-alpha OS=Dictyostelium discoideum GN=eef1a1 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 5.910e-30
Identity = 66/101 (65.35%), Postives = 78/101 (77.23%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPK---FLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 294
            QI  GY+PVLDCHT+HIA KF EI+ K+DRR+G  + KE      LKNGDA  V++ P++PM VE+F+EYPPLGRFAVRDMRQTVAVGVIKS  KK P  A
Sbjct:  340 QIHAGYSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVESFTEYPPLGRFAVRDMRQTVAVGVIKSTVKKAPGKA 440          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.435e-28
Identity = 54/85 (63.53%), Postives = 72/85 (84.71%), Query Frame = 1
Query:   13 GYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKS 267
            GY PV+DCHT+HIA KF +I++++D+R+GK L + P  +KNG +   +++P+KPM VETFS+YPPLGRFAVRDMRQTVAVG+IKS
Sbjct:  345 GYCPVVDCHTAHIACKFEKIMSEMDKRTGKVLRENPDIVKNGKSMMAQLVPSKPMCVETFSDYPPLGRFAVRDMRQTVAVGIIKS 429          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A1_XENLA (Elongation factor 1-alpha OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.609e-27
Identity = 56/94 (59.57%), Postives = 72/94 (76.60%), Query Frame = 1
Query:   13 GYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 294
            GY+PV+DCHT+HI  +FAE+  KIDRR+GK+LE  P  LK+GDA  + + P KP  VE F +YPPLGRFA RD++QTVAVGV+KSV+ K  + A
Sbjct:  359 GYSPVIDCHTAHITCQFAELQEKIDRRTGKKLEDNPGLLKSGDAAIITLKPIKPFCVERFFDYPPLGRFAARDLKQTVAVGVVKSVEHKAGAAA 452          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.569e-25
Identity = 52/89 (58.43%), Postives = 71/89 (79.78%), Query Frame = 1
Query:   13 GYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 279
            GY PVLD HT+H+A KF  +L+K + R+GK +E+ PKFLKNG++G V+++PTKP+ VE FS+Y  LGRF +RDM++TVAVGVI+ V  K
Sbjct:  341 GYQPVLDIHTAHVATKFKTLLSKNEARTGKLIEEAPKFLKNGESGIVELVPTKPLCVEEFSKYAALGRFVIRDMKRTVAVGVIQEVIHK 429          
BLAST of GO241870 vs. ExPASy Swiss-Prot
Match: EF1A_SPOFR (Elongation factor 1-alpha (Fragment) OS=Spodoptera frugiperda PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.763e-25
Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 1
Query:    1 QIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVR 228
            QI NGY PVLDCHT+HIA KFAEI  K+DRR+GK  E  PK +K+GDA  V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct:  338 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
The following BLAST results are available for this feature:
BLAST of GO241870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
EF1A2_DROME3.701e-3268.09Elongation factor 1-alpha 2 OS=Drosophila melanoga... [more]
EF1A_ENTHI3.133e-3168.13Elongation factor 1-alpha OS=Entamoeba histolytica... [more]
EF1A1_EUPCR4.092e-3166.67Elongation factor 1-alpha 1 OS=Euplotes crassus GN... [more]
EF1A_CRYPV6.981e-3165.96Elongation factor 1-alpha OS=Cryptosporidium parvu... [more]
EF1A_PLAFK2.653e-3062.77Elongation factor 1-alpha OS=Plasmodium falciparum... [more]
EF1A_DICDI5.910e-3065.35Elongation factor 1-alpha OS=Dictyostelium discoid... [more]
EF1A_BLAHO9.435e-2863.53Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1A1_XENLA1.609e-2759.57Elongation factor 1-alpha OS=Xenopus laevis PE=1 S... [more]
EF1A2_EUPCR2.569e-2558.43Elongation factor 1-alpha 2 OS=Euplotes crassus GN... [more]
EF1A_SPOFR9.763e-2565.79Elongation factor 1-alpha (Fragment) OS=Spodoptera... [more]

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Properties
Property NameValue
Genbank description518 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 655 5, mRNA sequence.