GO241781

Overview
NameGO241781
Unique NameGO241781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_BACC4 (Glycogen synthase OS=Bacillus cereus (strain B4264) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.814e-17
Identity = 44/83 (53.01%), Postives = 54/83 (65.06%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q I+LG+G    E+  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV
Sbjct:  324 QCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTV 406          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_ALKMQ (Glycogen synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.814e-17
Identity = 45/84 (53.57%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 252
            Q++VLGTG    E+   Q  I YPE+      F+  LA  I  G+DF L+PS FEPCGL QL A+RYGTVPIV  TGGL DT++
Sbjct:  324 QLVVLGTGDHQYEEIFRQAAIKYPERISTNLFFDEVLAQQIYGGSDFFLMPSLFEPCGLGQLIALRYGTVPIVRETGGLKDTIQ 407          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SYNP6 (Glycogen synthase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.369e-17
Identity = 43/83 (51.81%), Postives = 57/83 (68.67%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q +VLGTG++  E QL +L   YP +      ++  L+  I AG+D  L+PSRFEPCG+ Q+ A+RYG+VPIV  TGGLVDTV
Sbjct:  304 QFVVLGTGERYYETQLWELATRYPGRMSTYLMYDEGLSRRIYAGSDAFLVPSRFEPCGITQMLALRYGSVPIVRRTGGLVDTV 386          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SYNE7 (Glycogen synthase OS=Synechococcus elongatus (strain PCC 7942) GN=glgA PE=3 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 2.369e-17
Identity = 43/83 (51.81%), Postives = 57/83 (68.67%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q +VLGTG++  E QL +L   YP +      ++  L+  I AG+D  L+PSRFEPCG+ Q+ A+RYG+VPIV  TGGLVDTV
Sbjct:  304 QFVVLGTGERYYETQLWELATRYPGRMSTYLMYDEGLSRRIYAGSDAFLVPSRFEPCGITQMLALRYGSVPIVRRTGGLVDTV 386          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PSE14 (Glycogen synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.369e-17
Identity = 39/90 (43.33%), Postives = 60/90 (66.67%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 270
            QI ++G G+   E  + +L   +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+E+G TGF
Sbjct:  330 QIAIIGRGEPEEEDAMRELAARFPGRIGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIEDGVTGF 419          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_GRABC (Glycogen synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.369e-17
Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT 264
            Q++VLG+G K +E+ L Q    +P +    + ++  L+  I +GAD +LIPSRFEPCGL QL+AMRYG VPIV+  GGL DT+ +  T
Sbjct:  323 QLVVLGSGDKGLEQGLLQAAQTHPRQIAVFSGYDEALSRQIFSGADAMLIPSRFEPCGLTQLYAMRYGAVPIVSRVGGLADTIIDANT 410          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_THEM4 (Glycogen synthase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.094e-17
Identity = 40/85 (47.06%), Postives = 58/85 (68.24%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q ++LGTG +  E+  ++ +  +P+      KF+I LA  I A +D  L+PSR+EPCGL Q++++RYGT+PIV  TGGL DTV E
Sbjct:  325 QFVILGTGDEKYEEMFKKAQQEFPKNVSANVKFDINLAQKIYAASDMFLMPSRYEPCGLGQMYSLRYGTIPIVRYTGGLADTVLE 409          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PROMM (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.094e-17
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            QI+VLGTG++ +E  L QL I  P +      ++  LA +I  G+D  L+PSRFEPCG+ QL AMRYG+VP+V   GGLVDTV
Sbjct:  304 QIVVLGTGERGLESGLWQLAIQNPGRFSVFLTYDDDLARLIYGGSDAFLMPSRFEPCGISQLLAMRYGSVPVVRKVGGLVDTV 386          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_OCEIH (Glycogen synthase OS=Oceanobacillus iheyensis GN=glgA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.094e-17
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q+IVLG G++  E   + +E  YP+K      FN  LA  + A ADF+L+PS+FEPCGL QL A++Y TVPIV  TGGL DT+
Sbjct:  319 QLIVLGNGEQEFEYYFKDIEYRYPDKMITHLHFNESLARRLYASADFLLMPSKFEPCGLSQLIALQYKTVPIVRETGGLKDTI 401          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_HAEI8 (Glycogen synthase OS=Haemophilus influenzae (strain 86-028NP) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.094e-17
Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q+++LG+G    E+ + +L   YP+       ++  L+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV
Sbjct:  323 QLMILGSGAPHFEQGIRELAERYPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTV 405          
The following BLAST results are available for this feature:
BLAST of GO241781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA_BACC41.814e-1753.01Glycogen synthase OS=Bacillus cereus (strain B4264... [more]
GLGA_ALKMQ1.814e-1753.57Glycogen synthase OS=Alkaliphilus metalliredigens ... [more]
GLGA_SYNP62.369e-1751.81Glycogen synthase OS=Synechococcus sp. (strain ATC... [more]
GLGA_SYNE72.369e-1751.81Glycogen synthase OS=Synechococcus elongatus (stra... [more]
GLGA_PSE142.369e-1743.33Glycogen synthase OS=Pseudomonas syringae pv. phas... [more]
GLGA_GRABC2.369e-1748.86Glycogen synthase OS=Granulibacter bethesdensis (s... [more]
GLGA_THEM43.094e-1747.06Glycogen synthase OS=Thermosipho melanesiensis (st... [more]
GLGA_PROMM3.094e-1753.01Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_OCEIH3.094e-1751.81Glycogen synthase OS=Oceanobacillus iheyensis GN=g... [more]
GLGA_HAEI83.094e-1745.78Glycogen synthase OS=Haemophilus influenzae (strai... [more]

Pages

back to top
Properties
Property NameValue
Genbank description429 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 565 5, mRNA sequence.