GO241781

Overview
NameGO241781
Unique NameGO241781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_DEIGD (Glycogen synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=glgA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 46/100 (46.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query:    4 IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA 303
            ++VLG G   +   L      Y  +   V+  N  LAH I AGAD   +PSRFEPCGL Q+ A+RYGT+PIV  TGGLVDTV  G  GF+    + +  A
Sbjct:  303 VVVLGGGDPLLTAALHGWA--YHPRVAFVSGLNEALAHRIYAGADAFAMPSRFEPCGLSQMIALRYGTLPIVRETGGLVDTV-PGDVGFRFADATTEALA 399          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_CHLPD (Glycogen synthase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=glgA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 372
            Q+++ G+G K  EK        YPE+     ++     H+ IAG D +L+P R E CG++QL AM YGT+P+V + GG+++T+ E   G  +GS  +  E  D   V  +S     ALA Y  +
Sbjct:  338 QLVICGSGDKVYEKTFRDFAEQYPEQVSLQIEYTDAFMHLAIAGMDILLMPGRIESCGMMQLFAMSYGTIPVVYAGGGIIETIHELQEG--IGSGFIFHEYTDDSLVGKLS----EALAMYSDE 455          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_CHLL2 (Glycogen synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=glgA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 38/105 (36.19%), Postives = 60/105 (57.14%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEA 303
            Q+I+ G+G K  EK  +     YPE+      +   L H+ IAG D +L+P R E CG++QL AM YGT+P+  + GG+V+T+    ++  +GF    ++ D  A
Sbjct:  338 QLIICGSGDKEYEKYFQDFAAEYPEQVSVRTDYADTLLHLAIAGFDMLLMPGRIESCGMLQLFAMSYGTIPVAYAGGGIVETIDAVTDKSGSGFLFYDYTADAFA 442          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_BURTA (Glycogen synthase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=glgA PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q  + G G + +E+  + L   YP +      ++  LAH I AGAD +L  +RFEPCGL QL+AMRYGT+PIV   GGL D+V
Sbjct:  326 QFALHGRGDRALEQGFDALAAQYPRRVAVRIGYDETLAHRIHAGADILLHGARFEPCGLTQLYAMRYGTIPIVRRVGGLADSV 408          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_BORPA (Glycogen synthase OS=Bordetella parapertussis GN=glgA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.437e-14
Identity = 48/126 (38.10%), Postives = 65/126 (51.59%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT-------VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 357
            Q  ++G G+  +E  L  L   YP +      ++ PLAH + AGAD +L  SRFEP GL  L+AMRYGT+P+ +  GG+VDT       VEE   G   G      +  +P D+        RALA
Sbjct:  334 QFALIGRGEPALETALRALAARYPGRCAVHIGYDEPLAHRLHAGADLLLHGSRFEPFGLTPLYAMRYGTLPVASRVGGMVDTIRDPGPAVEESCAGQGTGFL---FDGSEPADMQLAVARALRALA 456          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_VIBCM (Glycogen synthase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.877e-14
Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q++++GTG+  +  +L ++   +  K   V  ++  LAH + AG+DF L+PS FE CGL Q+++M YGT+PIV   GGL DTV +
Sbjct:  330 QVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTVND 414          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_VIBCH (Glycogen synthase OS=Vibrio cholerae GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.877e-14
Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q++++GTG+  +  +L ++   +  K   V  ++  LAH + AG+DF L+PS FE CGL Q+++M YGT+PIV   GGL DTV +
Sbjct:  330 QVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTVND 414          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_VIBC3 (Glycogen synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.877e-14
Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q++++GTG+  +  +L ++   +  K   V  ++  LAH + AG+DF L+PS FE CGL Q+++M YGT+PIV   GGL DTV +
Sbjct:  330 QVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTVND 414          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_ACIAC (Glycogen synthase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.877e-14
Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q+ +LG+G   +E  L  L   +P        F+  LAH I AG+D  L+PSRFEPCGL Q+++  YGT P+V  TGGL D+V +
Sbjct:  332 QLAILGSGDPALESALRALAKRHPRHMHVTVGFDESLAHGIEAGSDSFLMPSRFEPCGLNQMYSQAYGTPPVVTPTGGLADSVTD 416          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_THET2 (Glycogen synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glgA PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTG 267
            ++ V G G   +++   + E   PE  R +  ++  +A +  AGA+ +L+PSRFEPCGL+Q+ A RYGT P+  + GGL DTVE+G  G
Sbjct:  296 RLYVQGVGDGGLQEAFLRAEEENPEGVRFLPAYDEAMARLAYAGAEAVLVPSRFEPCGLVQMIASRYGTPPVARAVGGLKDTVEDGRAG 384          
The following BLAST results are available for this feature:
BLAST of GO241781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA_DEIGD1.437e-1446.00Glycogen synthase OS=Deinococcus geothermalis (str... [more]
GLGA_CHLPD1.437e-1435.48Glycogen synthase OS=Chlorobium phaeobacteroides (... [more]
GLGA_CHLL21.437e-1436.19Glycogen synthase OS=Chlorobium limicola (strain D... [more]
GLGA_BURTA1.437e-1446.99Glycogen synthase OS=Burkholderia thailandensis (s... [more]
GLGA_BORPA1.437e-1438.10Glycogen synthase OS=Bordetella parapertussis GN=g... [more]
GLGA_VIBCM1.877e-1442.35Glycogen synthase OS=Vibrio cholerae serotype O1 (... [more]
GLGA_VIBCH1.877e-1442.35Glycogen synthase OS=Vibrio cholerae GN=glgA PE=3 ... [more]
GLGA_VIBC31.877e-1442.35Glycogen synthase OS=Vibrio cholerae serotype O1 (... [more]
GLGA_ACIAC1.877e-1444.71Glycogen synthase OS=Acidovorax avenae subsp. citr... [more]
GLGA_THET22.451e-1441.57Glycogen synthase OS=Thermus thermophilus (strain ... [more]

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Properties
Property NameValue
Genbank description429 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 565 5, mRNA sequence.