GO241781

Overview
NameGO241781
Unique NameGO241781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_THECA (Glycogen synthase OS=Thermus caldophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTG 267
            ++ V G G   +++   + E   PE  R +  ++  +A +  AGA+ +L+PSRFEPCGL+Q+ A RYGT P+  + GGL DTVE+G  G
Sbjct:  297 RLYVQGVGDGGLQEAFLRAEEENPEGVRFLPAYDEAMARLAYAGAEAVLVPSRFEPCGLVQMIASRYGTPPVARAVGGLKDTVEDGRAG 385          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SHISS (Glycogen synthase OS=Shigella sonnei (strain Ss046) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  323 QLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SHIFL (Glycogen synthase OS=Shigella flexneri GN=glgA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  323 QLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SHIF8 (Glycogen synthase OS=Shigella flexneri serotype 5b (strain 8401) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  323 QLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SHIDS (Glycogen synthase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  323 QLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SHIBS (Glycogen synthase OS=Shigella boydii serotype 4 (strain Sb227) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  323 QLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SHIB3 (Glycogen synthase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  323 QLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PROA2 (Glycogen synthase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 44/121 (36.36%), Postives = 72/121 (59.50%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q++V  +G K + ++L++    YPEK    ++F+  + H I+A +D +LIP+  E CG++QL A+ YG+VP+V + GG ++T+EE   G + GS  V  E      V ++  T   AL TY
Sbjct:  338 QLVVSVSGDKELIRRLQEKAKAYPEKLAVYSEFSDAIFHQIMASSDLLLIPAEVESCGMMQLFAIAYGSVPVVYTAGGNIETIEE-IAGDKNGSAFVFHE----YSVESLLATFEDALHTY 453          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PELPB (Glycogen synthase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q+I+ G+G K  EK  +   + +PE+     +++    H+ IAG D +L+P   E CG+IQ+ AM YGT+P+  + GG+V+T+EE
Sbjct:  338 QLIISGSGDKKYEKVFQDFALEHPEQVSVHGEYSDSFFHLAIAGLDILLMPGMIESCGMIQMFAMNYGTIPVAYAGGGIVETIEE 422          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_ECOUT (Glycogen synthase OS=Escherichia coli (strain UTI89 / UPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.451e-14
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q+ +LG G   +++        YP +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  323 QLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
The following BLAST results are available for this feature:
BLAST of GO241781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA_THECA2.451e-1441.57Glycogen synthase OS=Thermus caldophilus GN=glgA P... [more]
GLGA_SHISS2.451e-1442.35Glycogen synthase OS=Shigella sonnei (strain Ss046... [more]
GLGA_SHIFL2.451e-1442.35Glycogen synthase OS=Shigella flexneri GN=glgA PE=... [more]
GLGA_SHIF82.451e-1442.35Glycogen synthase OS=Shigella flexneri serotype 5b... [more]
GLGA_SHIDS2.451e-1442.35Glycogen synthase OS=Shigella dysenteriae serotype... [more]
GLGA_SHIBS2.451e-1442.35Glycogen synthase OS=Shigella boydii serotype 4 (s... [more]
GLGA_SHIB32.451e-1442.35Glycogen synthase OS=Shigella boydii serotype 18 (... [more]
GLGA_PROA22.451e-1436.36Glycogen synthase OS=Prosthecochloris aestuarii (s... [more]
GLGA_PELPB2.451e-1438.82Glycogen synthase OS=Pelodictyon phaeoclathratifor... [more]
GLGA_ECOUT2.451e-1442.35Glycogen synthase OS=Escherichia coli (strain UTI8... [more]

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Properties
Property NameValue
Genbank description429 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 565 5, mRNA sequence.