GO241781

Overview
NameGO241781
Unique NameGO241781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_XANAC (Glycogen synthase OS=Xanthomonas axonopodis pv. citri GN=glgA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.990e-20
Identity = 47/98 (47.96%), Postives = 66/98 (67.35%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 294
            QI V+G G+  +E+Q+ +L   YP +      F   LA  + AGADF+L+PSRFEPCGL Q++A R+G +PI  +TGGL+DTV++G TGF     SV+
Sbjct:  319 QIAVIGGGEPEIEQQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE 416          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_THESQ (Glycogen synthase OS=Thermotoga sp. (strain RQ2) GN=glgA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.904e-20
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            QI+VLGTG +  E    + +  YP+K     KF++ LA  I AGAD  L+PSR+EPCGL Q+ +MRYGT+P+V  TGGL DTV+E
Sbjct:  329 QIVVLGTGDEQYENAFRKFQERYPDKVSANIKFDVELAQKIYAGADIFLMPSRYEPCGLGQMFSMRYGTIPVVRYTGGLADTVKE 413          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_THEP1 (Glycogen synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glgA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.904e-20
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            QI+VLGTG +  E    + +  YP+K     KF++ LA  I AGAD  L+PSR+EPCGL Q+ +MRYGT+P+V  TGGL DTV+E
Sbjct:  329 QIVVLGTGDEQYENAFRKFQERYPDKVSANIKFDVELAQKIYAGADIFLMPSRYEPCGLGQMFSMRYGTIPVVRYTGGLADTVKE 413          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_THEMA (Glycogen synthase OS=Thermotoga maritima GN=glgA PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.904e-20
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            QI+VLGTG +  E    + +  YP+K     KF++ LA  I AGAD  L+PSR+EPCGL Q+ +MRYGT+P+V  TGGL DTV+E
Sbjct:  329 QIVVLGTGDEQYENAFRKFQERYPDKVSANIKFDVELAQKIYAGADIFLMPSRYEPCGLGQMFSMRYGTIPVVRYTGGLADTVKE 413          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_BACSU (Glycogen synthase OS=Bacillus subtilis GN=glgA PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.099e-20
Identity = 56/130 (43.08%), Postives = 73/130 (56.15%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGF-TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 372
            Q++VLGTG++  E      E  + EK R    F+ PLAH I AG+D  L+PS+FEPCGL QL A++YG +PIV  TGGL DTV     EEG   GF   +F+             +  T+ RAL+ Y  Q
Sbjct:  325 QLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEPLAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRETGGLYDTVRAYQEEEGTGNGFTFSAFNAH----------DLKFTIERALSFYCQQ 444          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_XANCP (Glycogen synthase OS=Xanthomonas campestris pv. campestris GN=glgA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 270
            QI V+G G+  +E+Q+ +L   YP +      F   LA  + AGADF+L+PSRFEPCGL Q++A R+G +PI  +TGGL+DTV++G TGF
Sbjct:  319 QIAVIGGGEPEIEQQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGF 408          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_XANC8 (Glycogen synthase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=glgA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 270
            QI V+G G+  +E+Q+ +L   YP +      F   LA  + AGADF+L+PSRFEPCGL Q++A R+G +PI  +TGGL+DTV++G TGF
Sbjct:  319 QIAVIGGGEPEIEQQVAELTRRYPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGF 408          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSI (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=SSII-3 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.698e-20
Identity = 43/83 (51.81%), Postives = 62/83 (74.70%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q+++LG+G++ +E  L++ E  +  K RG   F++ +AH I AGAD +++PSRFEPCGL QL+AM YGTVP+V + GGL DTV
Sbjct:  655 QLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTV 737          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: SSG2_PEA (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.698e-20
Identity = 43/84 (51.19%), Postives = 62/84 (73.81%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 252
            Q+++LGTG+  +E+ L++ E  + +K R    F++ +AH I AG+D +L+PSRFEPCGL QL+AM YGTVP+V   GGL DTV+
Sbjct:  597 QLVMLGTGRADLEQMLKEFEAQHCDKIRSWVGFSVKMAHRITAGSDILLMPSRFEPCGLNQLYAMSYGTVPVVHGVGGLRDTVQ 680          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_BACST (Glycogen synthase OS=Bacillus stearothermophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.136e-19
Identity = 58/128 (45.31%), Postives = 72/128 (56.25%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q++VLGTG    E+   Q+   YP K      F+ PLAH I AGAD  LIPS FEPCGL Q+ A+RYGT+PIV  TGGL DTV+       EG  GF   +F+             +  T+RRAL+ Y
Sbjct:  324 QLVVLGTGDWRFEQFFSQMAAAYPGKVGVYIGFHEPLAHQIYAGADLFLIPSLFEPCGLSQMIALRYGTIPIVRETGGLNDTVQSYNEITKEG-NGFSFTNFNAH----------DMLYTIRRALSFY 440          
The following BLAST results are available for this feature:
BLAST of GO241781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA_XANAC2.990e-2047.96Glycogen synthase OS=Xanthomonas axonopodis pv. ci... [more]
GLGA_THESQ3.904e-2052.94Glycogen synthase OS=Thermotoga sp. (strain RQ2) G... [more]
GLGA_THEP13.904e-2052.94Glycogen synthase OS=Thermotoga petrophila (strain... [more]
GLGA_THEMA3.904e-2052.94Glycogen synthase OS=Thermotoga maritima GN=glgA P... [more]
GLGA_BACSU5.099e-2043.08Glycogen synthase OS=Bacillus subtilis GN=glgA PE=... [more]
GLGA_XANCP6.660e-2050.00Glycogen synthase OS=Xanthomonas campestris pv. ca... [more]
GLGA_XANC86.660e-2050.00Glycogen synthase OS=Xanthomonas campestris pv. ca... [more]
SSY23_ORYSI8.698e-2051.81Soluble starch synthase 2-3, chloroplastic/amylopl... [more]
SSG2_PEA8.698e-2051.19Granule-bound starch synthase 2, chloroplastic/amy... [more]
GLGA_BACST1.136e-1945.31Glycogen synthase OS=Bacillus stearothermophilus G... [more]

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Properties
Property NameValue
Genbank description429 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 565 5, mRNA sequence.