GO241781

Overview
NameGO241781
Unique NameGO241781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA1_ANAVT (Glycogen synthase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.294e-12
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 1
Query:   97 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            FN  L+H+I AGAD I++PS +EPCGL Q+  ++YGTVPIV   GGLV+TV
Sbjct:  365 FNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYGTVPIVRGVGGLVNTV 415          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PARUW (Glycogen synthase OS=Protochlamydia amoebophila (strain UWE25) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.996e-12
Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = 1
Query:    1 QIIVLGTGKKP-MEKQLEQLEILYPEKARG--VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q I+LG+   P +  +  +L+  Y +      +   +  LAH+I AG+D  ++PS FEPCGL Q+ A++YGTVPIV  TGGL DT+
Sbjct:  339 QFILLGSSPIPSINDEFHRLKHQYTDHPHIHLILHHSEELAHLIYAGSDMFIVPSLFEPCGLTQIIALKYGTVPIVRRTGGLADTI 424          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PROVI (Glycogen synthase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=glgA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.913e-12
Identity = 29/85 (34.12%), Postives = 51/85 (60.00%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q+++ G+G +  EKQ  +    +PE             H+ IAG D +L+P + E CG++Q+ AM YGT+P+  + GG+V+T+++
Sbjct:  338 QLVICGSGDQKYEKQFREFADAHPETVSLHTDCPDSFIHLAIAGFDILLMPGKIESCGMLQMFAMSYGTIPVAFAGGGIVETIDD 422          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_AQUAE (Glycogen synthase OS=Aquifex aeolicus GN=glgA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.913e-12
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 1
Query:    7 IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            + LGTG+   E     +  +Y +  +  A+FN   A  + A +DFIL+PS FEPCGL Q+  MRYG VPIV  TGGL DTV++
Sbjct:  317 VFLGTGE--YENAFLDVSKIY-KNFKVFAEFNEGFARKLYASSDFILMPSYFEPCGLTQMIGMRYGCVPIVRKTGGLRDTVKD 396          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA1_NITOC (Glycogen synthase 1 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.675e-12
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 1
Query:  109 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            LAH I AGAD +++PS +EPCGL Q+ AM+YGTVPIV   GGL DTV
Sbjct:  366 LAHQIYAGADMLIVPSIYEPCGLTQMIAMKYGTVPIVRHVGGLADTV 412          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_NATTJ (Glycogen synthase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glgA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.942e-11
Identity = 45/103 (43.69%), Postives = 57/103 (55.34%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGF--TGFQMGSFS 288
            Q + LGTG    E+ L  L   +   +  + KF+  LA  I A +D  L+PS FEPCG+ Q  A+RYG+VPIV   GGL DTV     EEG    GF   SF+
Sbjct:  331 QFVFLGTGDPHYEQYLSYLAEKHQNLSAQI-KFDEGLARKIYAASDLFLMPSLFEPCGIGQQIAIRYGSVPIVRKVGGLHDTVYPSISEEGTRGIGFTFESFN 432          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_METJA (Probable glycogen synthase OS=Methanocaldococcus jannaschii GN=glgA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.942e-11
Identity = 30/83 (36.14%), Postives = 54/83 (65.06%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            + + L  G + +E++L+ L   +  +   +  +++PL+ ++ AG+D+I++PS +EPCGL+Q+ AM Y T  I   TGGL DT+
Sbjct:  329 RFVFLTKGDRDIEERLKNLANEHDGRILALIGYSLPLSSLVFAGSDWIIMPSYWEPCGLVQMEAMAYCTPVIATETGGLKDTI 411          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SULSY (Glycogen synthase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=glgA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.327e-11
Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 1
Query:   10 VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            +LGTG K      + +E  Y E       +N   +  + A ADF+L+PS FEPCGL Q+ AMRYGT+ +   TGGL DTV++
Sbjct:  325 ILGTGDKGYNDFFKSIEGKY-ENIFIKVDYNEAFSRKMYAAADFLLMPSLFEPCGLNQMIAMRYGTLVVARDTGGLKDTVKD 405          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PELLD (Glycogen synthase OS=Pelodictyon luteolum (strain DSM 273) GN=glgA PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.639e-11
Identity = 30/101 (29.70%), Postives = 54/101 (53.47%), Query Frame = 1
Query:    4 IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVD 294
            +++ G G K  EK        +P++            H+ IAG D +++  + E CG++Q+ AM YGT+P+  + GG+V+T++E    G +GF    ++ D
Sbjct:  339 LLICGAGDKKYEKSFRDFADAHPDRVSLSTDCPESFLHLAIAGLDMLVMAGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIDEVSEGGGSGFIFREYTPD 439          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_HYDS0 (Glycogen synthase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=glgA PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.639e-11
Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 1
Query:   94 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 288
            ++N  L+  + AGAD  L+PS +EPCG+ Q+ AMRYG +PIV  TGGL DTV       E  TGF    ++
Sbjct:  352 EYNDILSRKLYAGADMFLMPSEYEPCGIGQMIAMRYGAIPIVHKTGGLADTVVDYNEDNEHGTGFSFEDYT 422          
The following BLAST results are available for this feature:
BLAST of GO241781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA1_ANAVT2.294e-1260.78Glycogen synthase 1 OS=Anabaena variabilis (strain... [more]
GLGA_PARUW2.996e-1243.02Glycogen synthase OS=Protochlamydia amoebophila (s... [more]
GLGA_PROVI3.913e-1234.12Glycogen synthase OS=Prosthecochloris vibrioformis... [more]
GLGA_AQUAE3.913e-1246.99Glycogen synthase OS=Aquifex aeolicus GN=glgA PE=3... [more]
GLGA1_NITOC6.675e-1265.96Glycogen synthase 1 OS=Nitrosococcus oceani (strai... [more]
GLGA_NATTJ1.942e-1143.69Glycogen synthase OS=Natranaerobius thermophilus (... [more]
GLGA_METJA1.942e-1136.14Probable glycogen synthase OS=Methanocaldococcus j... [more]
GLGA_SULSY4.327e-1143.90Glycogen synthase OS=Sulfurihydrogenibium sp. (str... [more]
GLGA_PELLD9.639e-1129.70Glycogen synthase OS=Pelodictyon luteolum (strain ... [more]
GLGA_HYDS09.639e-1146.48Glycogen synthase OS=Hydrogenobaculum sp. (strain ... [more]

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Properties
Property NameValue
Genbank description429 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 565 5, mRNA sequence.