GO241781

Overview
NameGO241781
Unique NameGO241781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_ACICJ (Glycogen synthase OS=Acidiphilium cryptum (strain JF-5) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19
Identity = 54/130 (41.54%), Postives = 69/130 (53.08%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q+ VLGTG+  +E  L +     P +   +  F   L+H+I  GAD IL+PSRFEPCGL QL A RYG +P+V+  GGLVDTV +           TG Q G          PV  A +S  +RR  A Y
Sbjct:  323 QLAVLGTGETGIEASLREAVAARPGRVAAIIGFEESLSHLIQGGADAILVPSRFEPCGLTQLAAQRYGAIPVVSLVGGLVDTVIDANPVAISAGVATGIQFG----------PVSEAGLSDGLRRTAALY 442          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_THIDA (Glycogen synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgA PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.256e-18
Identity = 51/121 (42.15%), Postives = 73/121 (60.33%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            + ++LG+G+   E++L +L   +P +      ++  LAH I AGAD  L+PSRFEPCGL Q++++RYGT+PIV  TGGL DT+ +      +   S +    D  DVA     VRRALA Y
Sbjct:  333 RFVLLGSGQAAYEQRLTRLARQHPTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMYSLRYGTLPIVFKTGGLADTIVD-TNEASLADGSANGFVFDTPDVAHFVDAVRRALALY 452          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_MAGSA (Glycogen synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glgA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.256e-18
Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT-VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q+ V+GTG +P+E         +P +      ++ PLAH ++AG D +L+PSRFEPCGL Q +A RYGTVP+  +TGGL DT V+ G+     G    +    +  +V A    V RA+  Y
Sbjct:  329 QVAVVGTGDRPLEDGFRAAAAAHPTQVAARIGYSEPLAHRMMAGGDMLLMPSRFEPCGLTQFYAFRYGTVPVAHATGGLADTLVDTGYDTLMTG--KANGFVFEHSNVGAFQWAVERAVGLY 448          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_BACC1 (Glycogen synthase OS=Bacillus cereus (strain ATCC 10987) GN=glgA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.256e-18
Identity = 56/123 (45.53%), Postives = 70/123 (56.91%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q I+LG+G    EK  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+  +  TG   G    +  A D +       TVRRA+  Y
Sbjct:  324 QCIILGSGDSEYEKFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVRRAIEFY 440          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA2_NITOC (Glycogen synthase 2 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.640e-18
Identity = 54/130 (41.54%), Postives = 73/130 (56.15%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q++ LG G++  +  L+QL   YP +      ++  LAH + AGAD  L+PSRFEPCGL QL+A+RYGTVPI   TGGL DT+         +E  TGF     S           +A+ T ++RALA Y
Sbjct:  326 QVVFLGEGEERHQNALQQLASRYPNQIGVSISYDERLAHGVQAGADIFLMPSRFEPCGLTQLYALRYGTVPIARRTGGLSDTIVDATEKNLRQELATGFTFTESS----------PSALLTAIQRALACY 445          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PROMT (Glycogen synthase OS=Prochlorococcus marinus (strain NATL2A) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.142e-18
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 252
            Q++VLGTG + +E  L QL I YP +      ++  L+ +I  GAD  L+PSRFEPCG+ QL AMRYG +PIV   GGLVDTVE
Sbjct:  304 QVVVLGTGDRYLESSLWQLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVE 387          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PROM1 (Glycogen synthase OS=Prochlorococcus marinus (strain NATL1A) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.142e-18
Identity = 45/84 (53.57%), Postives = 57/84 (67.86%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 252
            Q++VLGTG + +E  L QL I YP +      ++  L+ +I  GAD  L+PSRFEPCG+ QL AMRYG +PIV   GGLVDTVE
Sbjct:  304 QVVVLGTGDRYLESSLWQLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVE 387          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_FLAJ1 (Glycogen synthase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.142e-18
Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 1
Query:    4 IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV--DPVDVAAVSTTVRRALATY 363
            I++LG+G   +E QL QL   Y         +N  LAH+I AG+D+IL+PSR EPCGL Q++AMRYGT+PIV  TGGL DTV +         F  D   +  D   V  +  ++ RA+  Y
Sbjct:  323 ILILGSGNAEIESQLTQLRNDYKGNYNVFIGYNEELAHLIYAGSDYILMPSRVEPCGLNQMYAMRYGTIPIVRRTGGLRDTVID---------FGDDGNGICHDQASVGDICYSINRAVKLY 435          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_ELUMP (Glycogen synthase OS=Elusimicrobium minutum (strain Pei191) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.142e-18
Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVD 294
            Q +V+GTG   MEK    L      K   VAK +  LAH + AG+D  L+PSRFEPCGL Q+ +MRYGTVPIV+  GGL+DTV+  +G T +  G F ++
Sbjct:  329 QFVVVGTGDSGMEKAFMALAKNNVGKVAYVAKVDEELAHRVYAGSDIFLMPSRFEPCGLSQMISMRYGTVPIVSRVGGLLDTVKGYDGITKYATGFFILE 428          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_DESAA (Glycogen synthase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.142e-18
Identity = 46/105 (43.81%), Postives = 66/105 (62.86%), Query Frame = 1
Query:    7 IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---------GFT--GFQMGSFS 288
            I+LG G++   + L +L   YP + R    FN PLAH I+AGAD + +PS +EPCGL Q++A++YGT+P+  +TGGL DTV +         GFT   F  G+F+
Sbjct:  327 ILLGNGEESYVRDLRRLAQAYPGRFRFEEAFNEPLAHRIMAGADMLCVPSLYEPCGLTQMYALQYGTIPVARATGGLADTVRDIKAFAGKGNGFTFDAFSPGAFA 431          
The following BLAST results are available for this feature:
BLAST of GO241781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA_ACICJ9.617e-1941.54Glycogen synthase OS=Acidiphilium cryptum (strain ... [more]
GLGA_THIDA1.256e-1842.15Glycogen synthase OS=Thiobacillus denitrificans (s... [more]
GLGA_MAGSA1.256e-1839.34Glycogen synthase OS=Magnetospirillum magneticum (... [more]
GLGA_BACC11.256e-1845.53Glycogen synthase OS=Bacillus cereus (strain ATCC ... [more]
GLGA2_NITOC1.640e-1841.54Glycogen synthase 2 OS=Nitrosococcus oceani (strai... [more]
GLGA_PROMT2.142e-1853.57Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_PROM12.142e-1853.57Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_FLAJ12.142e-1842.62Glycogen synthase OS=Flavobacterium johnsoniae (st... [more]
GLGA_ELUMP2.142e-1849.00Glycogen synthase OS=Elusimicrobium minutum (strai... [more]
GLGA_DESAA2.142e-1843.81Glycogen synthase OS=Desulfatibacillum alkenivoran... [more]

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Properties
Property NameValue
Genbank description429 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 565 5, mRNA sequence.