GO241781

Overview
NameGO241781
Unique NameGO241781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.798e-18
Identity = 48/121 (39.67%), Postives = 71/121 (58.68%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q++V+G+G   +E+    L   YPE       ++ PLAH + AGAD  ++PSRFEPCGL Q++++RYGTVP+V +TGGL DTV +          +   +  D     A++  + RALA Y
Sbjct:  328 QLVVVGSGDATLEQTARSLAERYPEHMGLHIGYSEPLAHQLEAGADIFVMPSRFEPCGLNQMYSLRYGTVPVVRNTGGLADTVVDADPAHLAARDATGIQ-FDEATPQALADALARALALY 447          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_RHOS4 (Glycogen synthase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=glgA PE=3 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 2.798e-18
Identity = 38/82 (46.34%), Postives = 58/82 (70.73%), Query Frame = 1
Query:    4 IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            + VLGTG  P+E  + +LE+ +P +      ++  L+H++ AG D +L+PSRFEPCGL Q++ +RYG +P+VA TGGL DT+
Sbjct:  324 LAVLGTGDAPLEAAMRELEVRFPGRVGVRIGYDEGLSHLMFAGGDAVLVPSRFEPCGLTQMYGLRYGAIPVVALTGGLADTI 405          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PETMO (Glycogen synthase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.798e-18
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q ++LGTG K  E+    L  LYP+K      F++ LA  I AG+D  L+PS++EPCGL Q+++MRYGTVP+V  TGGL DTV E
Sbjct:  325 QFVLLGTGDKKYEEYFVTLTKLYPKKISINITFDVDLAQKIYAGSDIFLMPSKYEPCGLGQMYSMRYGTVPVVRYTGGLKDTVSE 409          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_FINM2 (Glycogen synthase OS=Finegoldia magna (strain ATCC 29328) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.798e-18
Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q+++LGTG    E+  +  E  +P+K +    +N   +H I AGADF+++PS FEPCG+ QL AMRYGT+P+V  TGGL DTV + F  F           ++  D      T+RRA++ Y
Sbjct:  323 QVVILGTGDYSYEEMFKYYEWKFPDKLKANIYYNNEESHKIYAGADFLMMPSIFEPCGISQLIAMRYGTIPVVRETGGLRDTV-QSFNEFSKEGNGFSFTNINAHDFL---YTLRRAISFY 439          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_DESHD (Glycogen synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.798e-18
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            +++VLGTG    E++L++    YP K R +  +   LAH I AGAD  L+PSRFEPCG+ Q+ AM YGT+PIV  TGGL DTV
Sbjct:  312 RLVVLGTGDAHYEERLQRFAEGYPGKLRVILGYQEELAHRIYAGADIFLMPSRFEPCGIAQMIAMSYGTIPIVRETGGLKDTV 394          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_ANAD2 (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.798e-18
Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q+++LG+G    E+   +    +P++      F+  LAH I AGAD  L+PSRFEPCGL Q++++RYGTVP+V + GGL DTVE+ F GF  G+     E        A+ T  RRAL  +
Sbjct:  324 QVVLLGSGDAAYEQAFARAAREHPDRVAARIGFDEGLAHRIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRAVGGLADTVED-FDGFARGTGFRFSEYTP----QALLTATRRALDVF 439          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_HAEPS (Glycogen synthase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.654e-18
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q++VLG+G   +E  L   +  YP K      ++  L+H IIAG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  323 QLVVLGSGSPDLEWALRDAQSRYPHKIGLKIGYDEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVND 407          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_BACCQ (Glycogen synthase OS=Bacillus cereus (strain Q1) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.654e-18
Identity = 55/123 (44.72%), Postives = 70/123 (56.91%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q I+LG+G    E+  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+  +  TG   G    +  A D +       TVRRA+  Y
Sbjct:  324 QCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVRRAIEFY 440          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: SSY3_SOLTU (Soluble starch synthase 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS3 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.773e-18
Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQ-----LEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT---VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q+++LG+   P  +        QL   Y ++AR    ++ PL+H+I AGADFIL+PS FEPCGL QL AMRYG++P+V  TGGL DT   V+      Q      +  + D  D   V   + RAL+ +
Sbjct: 1063 QVVLLGSAPDPRVQNNFVNLANQLHSKYNDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQQCGLEPNGFSFDGADAGGVDYALNRALSAW 1191          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_RHOP2 (Glycogen synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.773e-18
Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q+ +LG G  P+E+      + YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV
Sbjct:  326 QLALLGAGDTPLEQGFRAAALKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTV 408          
The following BLAST results are available for this feature:
BLAST of GO241781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA_THISH2.798e-1839.67Glycogen synthase OS=Thioalkalivibrio sp. (strain ... [more]
GLGA_RHOS42.798e-1846.34Glycogen synthase OS=Rhodobacter sphaeroides (stra... [more]
GLGA_PETMO2.798e-1851.76Glycogen synthase OS=Petrotoga mobilis (strain DSM... [more]
GLGA_FINM22.798e-1840.50Glycogen synthase OS=Finegoldia magna (strain ATCC... [more]
GLGA_DESHD2.798e-1853.01Glycogen synthase OS=Desulfitobacterium hafniense ... [more]
GLGA_ANAD22.798e-1842.15Glycogen synthase OS=Anaeromyxobacter dehalogenans... [more]
GLGA_HAEPS3.654e-1849.41Glycogen synthase OS=Haemophilus parasuis serovar ... [more]
GLGA_BACCQ3.654e-1844.72Glycogen synthase OS=Bacillus cereus (strain Q1) G... [more]
SSY3_SOLTU4.773e-1839.53Soluble starch synthase 3, chloroplastic/amyloplas... [more]
GLGA_RHOP24.773e-1851.81Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]

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Properties
Property NameValue
Genbank description429 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 565 5, mRNA sequence.