GO241781

Overview
NameGO241781
Unique NameGO241781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PSEU2 (Glycogen synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=glgA PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.773e-18
Identity = 40/98 (40.82%), Postives = 64/98 (65.31%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 294
            QI ++G G+   E+ + +L   +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+E+G TGF     +V+
Sbjct:  330 QIAIIGRGEPEEEEAMRELAARFPGRVGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIEDGVTGFLFNESTVE 427          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIE (Glycogen synthase OS=Haemophilus influenzae (strain PittEE) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.773e-18
Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q+++LG+G   +E+ + +L   YPE       ++  L+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV
Sbjct:  323 QLMILGSGAPHLEQGIRELAAQYPENIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTV 405          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_ACTP7 (Glycogen synthase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.773e-18
Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q++VLG+G   +E  L +    +PE+      +N  L+H IIAG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV
Sbjct:  324 QLVVLGSGSPHLEYLLNEARSRHPEQIGIYIGYNEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTV 406          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_ACTP2 (Glycogen synthase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.773e-18
Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q++VLG+G   +E  L +    +PE+      +N  L+H IIAG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV
Sbjct:  324 QLVVLGSGSPHLEYLLNEARSRHPEQIGIYIGYNEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTV 406          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPS (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.233e-18
Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q+ +LG G  P+E       + YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV
Sbjct:  326 QLALLGAGDAPLEAGFRDAALKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTV 408          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PSEPF (Glycogen synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=glgA PE=3 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.233e-18
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 294
            QI ++G G+   E+ + +L + +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+E G TGF     + D
Sbjct:  332 QIAIIGRGEPEEEQAMRELALRFPGQIGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIENGVTGFLFNESTAD 429          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_LACAC (Glycogen synthase OS=Lactobacillus acidophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.233e-18
Identity = 50/103 (48.54%), Postives = 63/103 (61.17%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFS 288
            QI++LG G    E +L ++   YP+K + +  F++ LA  I AGAD  L+PS FEPCGL QL A+RYGT+PIV   GGL DTV        EG TGF    FS
Sbjct:  324 QIVILGNGDPYYEHRLMEIAERYPDKLKVILAFDVKLAQRIYAGADSFLMPSAFEPCGLSQLIALRYGTLPIVHEIGGLADTVWVYDETTNEG-TGFGFKEFS 425          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_THEAB (Glycogen synthase OS=Thermosipho africanus (strain TCF52B) GN=glgA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.141e-18
Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 255
            Q ++LGTG K  E+  + +E  +P+K      F+I LA  I A +D  L+PSR+EPCGL Q++++RYGT+P+V  TGGL DTV E
Sbjct:  329 QFVLLGTGDKKYEEMFKDIEKEFPDKMSANITFDIVLAQKIYASSDMFLMPSRYEPCGLGQMYSLRYGTIPVVRYTGGLADTVME 413          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SYNSC (Glycogen synthase OS=Synechococcus sp. (strain CC9605) GN=glgA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17
Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVD 318
            QI+VLGTG + +E  L QL   +P K      ++  L+ +I  G+D  L+PSRFEPCG+ QL+AMRYG+VP+V   GGLVDTV         G+ F  D    +PVD
Sbjct:  304 QIVVLGTGDRGLESGLWQLASRHPGKCAVFLTYDDDLSRLIYGGSDAFLMPSRFEPCGISQLYAMRYGSVPVVRKVGGLVDTVPPHIPAADSGTGFCFD--RFEPVD 408          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SYNPW (Glycogen synthase OS=Synechococcus sp. (strain WH7803) GN=glgA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17
Identity = 50/112 (44.64%), Postives = 67/112 (59.82%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVD 318
            QI+VLGTG + +E  L QL   +P +      ++  L+ +I AG+D  L+PSRFEPCG+ QL+AMRYG VP+V   GGLVDTV      ++  TGF    F       +PVD
Sbjct:  304 QIVVLGTGDRGLESGLWQLASRHPGRVAVFLTYDDALSRLIYAGSDAFLMPSRFEPCGISQLYAMRYGCVPVVRKVGGLVDTVPPHDPRQKSGTGFCFDRF-------EPVD 408          
The following BLAST results are available for this feature:
BLAST of GO241781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA_PSEU24.773e-1840.82Glycogen synthase OS=Pseudomonas syringae pv. syri... [more]
GLGA_HAEIE4.773e-1846.99Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA_ACTP74.773e-1850.60Glycogen synthase OS=Actinobacillus pleuropneumoni... [more]
GLGA_ACTP24.773e-1850.60Glycogen synthase OS=Actinobacillus pleuropneumoni... [more]
GLGA_RHOPS6.233e-1851.81Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_PSEPF6.233e-1840.82Glycogen synthase OS=Pseudomonas fluorescens (stra... [more]
GLGA_LACAC6.233e-1848.54Glycogen synthase OS=Lactobacillus acidophilus GN=... [more]
GLGA_THEAB8.141e-1848.24Glycogen synthase OS=Thermosipho africanus (strain... [more]
GLGA_SYNSC1.063e-1745.79Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_SYNPW1.063e-1744.64Glycogen synthase OS=Synechococcus sp. (strain WH7... [more]

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Properties
Property NameValue
Genbank description429 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 565 5, mRNA sequence.