GO241781

Overview
NameGO241781
Unique NameGO241781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PSESM (Glycogen synthase OS=Pseudomonas syringae pv. tomato GN=glgA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17
Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 294
            QI ++G G+   E  + +L   +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+E+G TGF     +V+
Sbjct:  330 QIAIIGRGEPEEEDAMRELAARFPGRIGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIEDGVTGFLFNESTVE 427          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_LEPCP (Glycogen synthase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=glgA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17
Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV--------EEGFTGFQMGSFSVD 294
            Q  +LG+G   ME +  +L   +P  A     ++   AH +IAG+D IL+PSRFEPCGL QL+ ++YGT+P+V   GGLVDTV        +   TGF    FS D
Sbjct:  333 QFALLGSGDAGMENEFRRLAEQHPTAAAVRLGYDEAFAHRLIAGSDLILVPSRFEPCGLTQLYGLKYGTLPVVRRVGGLVDTVADARLETLDHDATGFVFDDFSAD 438          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_LACLA (Glycogen synthase OS=Lactococcus lactis subsp. lactis GN=glgA PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17
Identity = 58/131 (44.27%), Postives = 72/131 (54.96%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 372
            QI++LGTG   +E+        YP+K      F+I  A  I AG+DF L+PS FEPCGL Q+ AMRYGT+PIV   GGL DTV       +EG TGF      VD E    V+      T+ RAL  YG +
Sbjct:  327 QIVLLGTGFPEIEEGFRYFSQKYPDKLSANIAFDIQFAQEIYAGSDFFLMPSAFEPCGLSQMIAMRYGTLPIVHEIGGLKDTVIPFNPISKEG-TGFGF----VDFEGQILVE------TINRALEVYGKE 446          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_BACHK (Glycogen synthase OS=Bacillus thuringiensis subsp. konkukian GN=glgA PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17
Identity = 44/84 (52.38%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 252
            Q I+LG+G    E+  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+
Sbjct:  324 QCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQ 407          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_BACCZ (Glycogen synthase OS=Bacillus cereus (strain ZK / E33L) GN=glgA PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17
Identity = 44/84 (52.38%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 252
            Q I+LG+G    E+  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+
Sbjct:  324 QCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQ 407          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_BACAN (Glycogen synthase OS=Bacillus anthracis GN=glgA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17
Identity = 44/84 (52.38%), Postives = 55/84 (65.48%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 252
            Q I+LG+G    E+  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+
Sbjct:  324 QCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQ 407          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_ACIBL (Glycogen synthase OS=Acidobacteria bacterium (strain Ellin345) GN=glgA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17
Identity = 51/121 (42.15%), Postives = 72/121 (59.50%), Query Frame = 1
Query:    7 IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            +VLG+G K  E  + +L   YP +      ++  LAH I AG+D  L+PSR+EPCGL Q++++RYGTVPIV +TGGL DT+E  +  T    G   V+    D +D      TVR+AL  +
Sbjct:  327 VVLGSGDKTYEDLMRRLSKQYPNRFAVRVAYDNALAHKIEAGSDMFLMPSRYEPCGLNQIYSLRYGTVPIVRATGGLDDTIENWDPITNRGTGFKFVEYSGEDMLD------TVRKALELF 441          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PROM4 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=glgA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.389e-17
Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVD 318
            QI+VLGTG+  +E  L QL   YP +      ++  L+ +I AG D  L+PSRFEPCG+ QL AMRYG++P+V + GGLVDTV       Q G+ F  D    +P+D
Sbjct:  304 QIVVLGTGESALESALWQLATEYPGRFAVFLTYDDYLSRLIYAGTDAFLMPSRFEPCGISQLLAMRYGSIPVVRNVGGLVDTVSPHDPSKQTGTGFCFD--RFEPID 408          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_HAES1 (Glycogen synthase OS=Haemophilus somnus (strain 129Pt) GN=glgA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.389e-17
Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q+ +LG+G   +E  +  L   YPE       ++  L+H++IAG D IL+PSRFEPCGL QL+ ++YGT+P+V STGGL DTV
Sbjct:  323 QLAILGSGSAHLEAGINWLAQEYPENIAVKIGYDEALSHLMIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRSTGGLADTV 405          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_ANADF (Glycogen synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.389e-17
Identity = 42/94 (44.68%), Postives = 64/94 (68.09%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 282
            Q+++LGTG+  +E+   +     P++      F+  LAH + AGAD  L+PSRFEPCGL Q++++RYGT+P+V + GGL DTVE+ F G+  G+
Sbjct:  323 QLVLLGTGRPELEEAFRRAARERPDRMAARIGFDEGLAHRMEAGADLFLMPSRFEPCGLNQMYSLRYGTIPVVRAVGGLEDTVED-FDGWSRGT 415          
The following BLAST results are available for this feature:
BLAST of GO241781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA_PSESM1.063e-1740.82Glycogen synthase OS=Pseudomonas syringae pv. toma... [more]
GLGA_LEPCP1.063e-1743.40Glycogen synthase OS=Leptothrix cholodnii (strain ... [more]
GLGA_LACLA1.063e-1744.27Glycogen synthase OS=Lactococcus lactis subsp. lac... [more]
GLGA_BACHK1.063e-1752.38Glycogen synthase OS=Bacillus thuringiensis subsp.... [more]
GLGA_BACCZ1.063e-1752.38Glycogen synthase OS=Bacillus cereus (strain ZK / ... [more]
GLGA_BACAN1.063e-1752.38Glycogen synthase OS=Bacillus anthracis GN=glgA PE... [more]
GLGA_ACIBL1.063e-1742.15Glycogen synthase OS=Acidobacteria bacterium (stra... [more]
GLGA_PROM41.389e-1745.79Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_HAES11.389e-1749.40Glycogen synthase OS=Haemophilus somnus (strain 12... [more]
GLGA_ANADF1.389e-1744.68Glycogen synthase OS=Anaeromyxobacter sp. (strain ... [more]

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Properties
Property NameValue
Genbank description429 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 565 5, mRNA sequence.