GO241781

Overview
NameGO241781
Unique NameGO241781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA2_AGRT5 (Glycogen synthase 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgA2 PE=3 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.389e-17
Identity = 53/130 (40.77%), Postives = 73/130 (56.15%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT--------VEEGF-TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            ++IV G G   +E  L+ L   YPE       ++  LAHMI AG+DFI+ PSRFEPCGL QL+A+RYG +PIV+ TGGL +T        +E G  TGFQ           +P +   +   + RA++ Y
Sbjct:  319 RLIVHGEGDTALEDSLQALAKRYPELVCAHIGYDERLAHMIQAGSDFIIQPSRFEPCGLTQLYALRYGALPIVSRTGGLAETIIDANDAAIEAGVATGFQF----------EPANEDDLRAALERAISAY 438          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA1_SYNY3 (Glycogen synthase 1 OS=Synechocystis sp. (strain PCC 6803) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.389e-17
Identity = 50/106 (47.17%), Postives = 63/106 (59.43%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS-VDC 297
            Q+I+LGTG +  E QL Q+   +P +       N  L+  + AGAD  L+PSRFEPCGL QL AMRYG +PIV  TGGLVDTV       E  TG+    +  +DC
Sbjct:  304 QLIILGTGDRHYETQLWQMASRFPGRMAVQLLHNDALSRRVYAGADVFLMPSRFEPCGLSQLMAMRYGCIPIVRRTGGLVDTVSFYDPINEAGTGYCFDRYEPLDC 409          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_SYNS3 (Glycogen synthase OS=Synechococcus sp. (strain CC9311) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.814e-17
Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVD 318
            QI+VLGTG + +E  L Q+   +P +      ++  L+ +I AG+D  L+PSRFEPCG+ QL AMRYG VP+V   GGLVDTV      ++  TGF    F       DPVD
Sbjct:  304 QIVVLGTGDRGLESGLWQMASRHPGRVSVFLTYDDDLSRLIYAGSDAFLMPSRFEPCGISQLLAMRYGCVPVVRKVGGLVDTVPPHDPAQQSGTGFCFDRF-------DPVD 408          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PSEPK (Glycogen synthase OS=Pseudomonas putida (strain KT2440) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.814e-17
Identity = 40/98 (40.82%), Postives = 64/98 (65.31%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 294
            QI ++G G+   E+ + +L + +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+E G TGF     +V+
Sbjct:  366 QIAIIGRGEPEEEQAMRELALRHPGRIGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIECGVTGFLFNESTVE 463          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_PROM3 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.814e-17
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            QI+VLGTG++ +E  L QL I  P +      ++  LA +I  G+D  L+PSRFEPCG+ QL AMRYG+VP+V   GGLVDTV
Sbjct:  304 QIVVLGTGERGLESSLWQLAIQNPGRFSVFLTYDDDLARLIYGGSDAFLMPSRFEPCGISQLLAMRYGSVPVVRKVGGLVDTV 386          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIN (Glycogen synthase OS=Haemophilus influenzae GN=glgA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.814e-17
Identity = 38/83 (45.78%), Postives = 59/83 (71.08%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q+++LG+G   +E+ + +L   YP+       ++  L+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV
Sbjct:  323 QLMILGSGAPHLEQGIRELAERYPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTV 405          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIG (Glycogen synthase OS=Haemophilus influenzae (strain PittGG) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.814e-17
Identity = 38/83 (45.78%), Postives = 59/83 (71.08%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q+++LG+G   +E+ + +L   YP+       ++  L+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV
Sbjct:  323 QLMILGSGAPHLEQGIRELAERYPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTV 405          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_FRATN (Glycogen synthase OS=Francisella tularensis subsp. novicida (strain U112) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.814e-17
Identity = 49/130 (37.69%), Postives = 71/130 (54.62%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 363
            Q+++LG+G K +E+        YP+       ++   AH IIAG+D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y
Sbjct:  331 QVVLLGSGDKALEEVFLAAAKKYPKSIAVQIGYDEEQAHRIIAGSDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVTDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALY 450          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_CLOPE (Glycogen synthase OS=Clostridium perfringens GN=glgA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.814e-17
Identity = 46/95 (48.42%), Postives = 58/95 (61.05%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMG 279
            Q+++LGTG    E   + L+ LYP K     KF+  LAH I A +D  L+PS FEPCGL QL A+RYG +PIV  TGGL DT+     +TG   G
Sbjct:  330 QLVILGTGDYNYENHFKGLQELYPTKVSANIKFDNGLAHRIYASSDIFLMPSLFEPCGLGQLIALRYGAIPIVRETGGLKDTIHSYNKYTGIGNG 424          
BLAST of GO241781 vs. ExPASy Swiss-Prot
Match: GLGA_BACCR (Glycogen synthase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=glgA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.814e-17
Identity = 44/83 (53.01%), Postives = 54/83 (65.06%), Query Frame = 1
Query:    1 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 249
            Q I+LG+G    E+  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV
Sbjct:  324 QCIILGSGDSEYEQFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTV 406          
The following BLAST results are available for this feature:
BLAST of GO241781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 360
Match NameE-valueIdentityDescription
GLGA2_AGRT51.389e-1740.77Glycogen synthase 2 OS=Agrobacterium tumefaciens (... [more]
GLGA1_SYNY31.389e-1747.17Glycogen synthase 1 OS=Synechocystis sp. (strain P... [more]
GLGA_SYNS31.814e-1744.64Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_PSEPK1.814e-1740.82Glycogen synthase OS=Pseudomonas putida (strain KT... [more]
GLGA_PROM31.814e-1753.01Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_HAEIN1.814e-1745.78Glycogen synthase OS=Haemophilus influenzae GN=glg... [more]
GLGA_HAEIG1.814e-1745.78Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA_FRATN1.814e-1737.69Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_CLOPE1.814e-1748.42Glycogen synthase OS=Clostridium perfringens GN=gl... [more]
GLGA_BACCR1.814e-1753.01Glycogen synthase OS=Bacillus cereus (strain ATCC ... [more]

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Properties
Property NameValue
Genbank description429 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 565 5, mRNA sequence.