GO241776

Overview
NameGO241776
Unique NameGO241776
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RL7_CANGA (60S ribosomal protein L7 OS=Candida glabrata GN=RPL7 PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.580e-63
Identity = 120/240 (50.00%), Postives = 167/240 (69.58%), Query Frame = 1
Query:  124 PESVLKK----QKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXXR--NHYVEGGDAGNRENYVNELIRRMN 825
            PES LKK    +K++EE+  A+      +K    + R  I  R   + KE+   E+ +I  KREAK  G +YV+ + KL+F++RI+GIN I PK +K+LQLLRL QI +G F+KV KAT  +L  +EPYV YGYP+  +VR+L+YKRG+GK++KQRIAL+DN+I+E  LGKFGI+ ++DLIHEI+TVGPHFK+ANNFLWPF            R   H+++GG  GNRE ++N+L++ MN
Sbjct:    9 PESQLKKAKYDEKKSEEFLKARAARRVANK----QKRAAILERNAAHQKEYEAAERAVIDAKREAKASGSYYVEAQPKLVFVVRIKGINKIPPKPRKVLQLLRLTQINSGTFVKVTKATSELLKLIEPYVAYGYPSYSTVRQLVYKRGHGKINKQRIALSDNAIVEANLGKFGILSIDDLIHEIVTVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREQFINKLVKAMN 244          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RL7_DROME (60S ribosomal protein L7 OS=Drosophila melanogaster GN=RpL7 PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 3.295e-61
Identity = 123/236 (52.12%), Postives = 166/236 (70.34%), Query Frame = 1
Query:  121 VPESVLKKQKRNEEWALAK-KQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGK-FGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNRENYVNELIRRM 822
            VPES LK  K+     +A+ K+ L+ +    L  ++ +  RA++Y  E+ + E+  I+L+R AK +  FYV  EAKL F++RIRGIN + PK +K+LQL RLRQI NGVF+K+NKAT+NML   EPY+T+GYPNLKSVRELIYKRG+ K ++QR+ +TDN +IE+ L +   I C+EDL+HEI TVGP+FK A+NFLWPF             NHYV GGD GNRE+ +N L+R+M
Sbjct:   17 VPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLV-RAEKYQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFKYASNFLWPFKLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKM 251          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RL72_PARTE (60S ribosomal protein L7 2 OS=Paramecium tetraurelia GN=Rpl7-2 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.871e-59
Identity = 113/245 (46.12%), Postives = 167/245 (68.16%), Query Frame = 1
Query:  100 EVEAKAPVPESVLKKQKRNEEW--ALAKK--QELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNRENYVNELIRRM 822
            +++ +  VPE+V KK +R+ +   A+AK+  + L  +K  + +  K     A+ Y  E+   +K L+   R+AK +GGFYV  EAKL+ ++RIRGIN ++P+ ++ L+LL+LRQ+ N  F++VNKAT+ M+ +VEPYVTYGYP+   ++ LIYKRGY K++ QRI +T+N++IE+ LGK GI  +EDLIHEI TVGPHFKEAN FLW F            R  ++  GD GNRE+ +N+L++RM
Sbjct:    7 KIQVEQKVPENVAKKTQRDSKLRDAVAKRRTERLAANKTRRAQWEKT----AQAYEAEYKAADKSLVDNLRKAKTEGGFYVPAEAKLILVVRIRGINTLNPQVRQTLRLLKLRQLHNAAFVRVNKATIEMIRKVEPYVTYGYPSRAVIKNLIYKRGYAKINGQRIPITNNNVIEQQLGKVGIHSVEDLIHEITTVGPHFKEANRFLWAFKLRGPRGGFIAKRRSFINQGDWGNREDLINDLVKRM 247          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RL71_PARTE (60S ribosomal protein L7 1 OS=Paramecium tetraurelia GN=Rpl7-1 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.871e-59
Identity = 113/245 (46.12%), Postives = 167/245 (68.16%), Query Frame = 1
Query:  100 EVEAKAPVPESVLKKQKRNEEW--ALAKK--QELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNRENYVNELIRRM 822
            +++ +  VPE+V KK +R+ +   A+AK+  + L  +K  + +  K     A+ Y  E+   +K L+   R+AK +GGFYV  EAKL+ ++RIRGIN ++P+ ++ L+LL+LRQ+ N  F++VNKAT+ M+ +VEPYVTYGYP+   ++ LIYKRGY K++ QRI +T+N++IE+ LGK GI  +EDLIHEI TVGPHFKEAN FLW F            R  ++  GD GNRE+ +N+L++RM
Sbjct:    7 KIQVEQKVPENVAKKTQRDSKLRDAVAKRRTERLAANKTRRAQWEKT----AQAYEAEYKAADKSLVDNLRKAKTEGGFYVPAEAKLILVVRIRGINTLNPQVRQTLRLLKLRQLHNAAFVRVNKATIEMIRKVEPYVTYGYPSRAVIKNLIYKRGYAKINGQRIPITNNNVIEQQLGKVGIHSVEDLIHEITTVGPHFKEANRFLWAFKLRGPRGGFIAKRKSFINQGDWGNREDLINDLVKRM 247          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RL7A_SCHPO (60S ribosomal protein L7-A OS=Schizosaccharomyces pombe GN=rpl7a PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.341e-54
Identity = 110/233 (47.21%), Postives = 153/233 (65.67%), Query Frame = 1
Query:  124 PESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXXR-NHYVEGGDAGNRENYVNELIRR 819
            PE +LKK+K NE     + ++    K+ + ++RK  + RA+ +   + ++E+  I+L R AK KG  +V  E KLLF+IRI G+  + PK +K+L+LLRL +I N VF++ NKA   ML  VEPYV YG PNL SVRELIYKRG+GK++ QRIAL+DN++IE+ALGK+ +I +ED+IHEI  VG HFKE   FLWPF            +  H+ EG  AG     +NELI++
Sbjct:   15 PEVLLKKRKVNERTRKERVEQAIAKKEAQKKNRKETFKRAETFINNYRQRERERIRLNRSAKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGFGKINGQRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTLTPVKHSLMEKKVKHFNEGRKAGYCGEEINELIKK 247          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RL71_ARATH (60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.344e-46
Identity = 103/247 (41.70%), Postives = 150/247 (60.73%), Query Frame = 1
Query:   94 MAEVEAKAP--VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXXRNH-YVEGGDAGNRENYVNELIRRMN 825
            MAE EAK    +PE VLKK+K  +E A  +K++LE     K + +     R + +  EF  +E  +I++K+  K         ++ L+FIIRI+G N + PKTK+IL  L+L+ +F GVF K   +    L +V+PYVTYGYPN KSV++LIYK+G   ++   + LTDN+IIE+ALG+  I+ +EDL++EI  VG HF+E   FL P             +   + EGGD GNRE+ +N+LI +MN
Sbjct:    1 MAEEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSDIKRPEDFVHEFRAKEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVLHRKKQVFSEGGDTGNREDKINDLISKMN 247          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RL7L_PONAB (60S ribosomal protein L7-like 1 OS=Pongo abelii GN=RPL7L1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.844e-42
Identity = 96/246 (39.02%), Postives = 146/246 (59.35%), Query Frame = 1
Query:   94 MAEVEA-KAP-VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNRENYVNELIRRMN 825
            MAE E  K P VPE++LKK+K  +     + ++   +KK + + + L + R + +  +   Q++ +++L+R         +  +  L F++RI  I+ +    ++ +  LRL++IF+GVF+KV    + ML  VEPYVT+G+PNLKSVRELI KRG  K+  + I LTDN++IE+ LGKFG+IC+EDLIHEI   G HF+E + FL PF                 E G  G R   +N+LIR++N
Sbjct:    1 MAEQEQRKIPLVPENLLKKRKAYQALKATQAEQALLAKKEQRKGKGLRFKRLESFLHDSWRQKRDMVRLRRLEMKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLRPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RL7L_HUMAN (60S ribosomal protein L7-like 1 OS=Homo sapiens GN=RPL7L1 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.221e-41
Identity = 96/246 (39.02%), Postives = 145/246 (58.94%), Query Frame = 1
Query:   94 MAEVEA-KAP-VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNRENYVNELIRRMN 825
            MAE E  K P VPE++LKK+K  +     + ++   +KK + + + L + R + +  +   Q++  ++L+R         +  +  L F++RI  I+ +    ++ +  LRL++IF+GVF+KV    + ML  VEPYVT+G+PNLKSVRELI KRG  K+  + I LTDN++IE+ LGKFG+IC+EDLIHEI   G HF+E + FL PF                 E G  G R   +N+LIR++N
Sbjct:    1 MAEQEQRKIPLVPENLLKKRKAYQALKATQAKQALLAKKEQKKGKGLRFKRLESFLHDSWRQKRDKVRLRRLEVKPHALELPDKHSLAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLCPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RL7L_PIG (60S ribosomal protein L7-like 1 OS=Sus scrofa GN=RPL7L1 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.207e-40
Identity = 93/247 (37.65%), Postives = 143/247 (57.89%), Query Frame = 1
Query:   94 MAEVEAKAP---VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNRENYVNELIRRMN 825
            MAE E +     VPE++LKK+K  +     + ++    KK + + ++L + R + +  +   Q +  ++L+R      G  V  +  L F++RI  I+ +    ++ +  LRL++IF+GVF++V   T+  L  VEPYVT+G+PNLKSVRELI KRG  K+  + I LTDN++IE+ LGKFG+IC+EDLIHEI   G +F+  + FL PF                 E G  G R   +N+LIR++N
Sbjct:    1 MAEEEQRKKIPLVPENLLKKRKAYQALKATQAKQALLQKKEQRKGKELKFKRLEWFLHDSWRQLRDRVRLRRLEVKPHGLEVPDKHSLAFVVRIERISGVSSVVQRTIARLRLKKIFSGVFMQVTPQTIKTLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKIIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKNFQAISGFLRPFQLSVARHATKNRVGFLKEVGSPGYRGERINQLIRQLN 247          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RL7L_MOUSE (60S ribosomal protein L7-like 1 OS=Mus musculus GN=Rpl7l1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.079e-39
Identity = 85/235 (36.17%), Postives = 140/235 (59.57%), Query Frame = 1
Query:  121 VPESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXXRNHYVEGGDAGNRENYVNELIRRMN 825
            VPE++LKK+K  +     + ++   +K+ + + ++  + R + +  +   Q++  ++++R         V  +  L F+IR+  I  +    K  +  L L+++F+GVF+KV   ++ ML  VEPYVT+G+PNLKSVRELI KRG  K++ + + LTDN++IE+ LG+FG+IC+EDLIHEI   G HF+E ++FL PF                 E G  G R + +N+LIR++N
Sbjct:   13 VPENLLKKRKAYQALKATQAKQALLAKRER-KGKQFRFRRLESFVHDSWRQQRDKVRVQRLEVKPRALEVPDKHPLAFVIRMERIEGVSLLVKSTIMKLGLKKLFSGVFVKVTPQSVRMLRTVEPYVTWGFPNLKSVRELILKRGQAKINNKTVPLTDNTVIEEHLGRFGVICLEDLIHEIAFPGKHFQEVSSFLCPFLLSVARHATRNRVGFRKEMGSPGYRGDRINQLIRQLN 246          
The following BLAST results are available for this feature:
BLAST of GO241776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RL7_CANGA1.580e-6350.0060S ribosomal protein L7 OS=Candida glabrata GN=RP... [more]
RL7_DROME3.295e-6152.1260S ribosomal protein L7 OS=Drosophila melanogaste... [more]
RL72_PARTE6.871e-5946.1260S ribosomal protein L7 2 OS=Paramecium tetraurel... [more]
RL71_PARTE6.871e-5946.1260S ribosomal protein L7 1 OS=Paramecium tetraurel... [more]
RL7A_SCHPO1.341e-5447.2160S ribosomal protein L7-A OS=Schizosaccharomyces ... [more]
RL71_ARATH1.344e-4641.7060S ribosomal protein L7-1 OS=Arabidopsis thaliana... [more]
RL7L_PONAB5.844e-4239.0260S ribosomal protein L7-like 1 OS=Pongo abelii GN... [more]
RL7L_HUMAN2.221e-4139.0260S ribosomal protein L7-like 1 OS=Homo sapiens GN... [more]
RL7L_PIG3.207e-4037.6560S ribosomal protein L7-like 1 OS=Sus scrofa GN=R... [more]
RL7L_MOUSE2.079e-3936.1760S ribosomal protein L7-like 1 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank description424 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 560 5, mRNA sequence.