GO241776

Overview
NameGO241776
Unique NameGO241776
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RLP7_DEBHA (Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii GN=RLP7 PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.806e-25
Identity = 79/222 (35.59%), Postives = 125/222 (56.31%), Query Frame = 1
Query:  124 PESVLKKQKRNEEWAL-----AKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQE------KVLIQLKREA---KLKGGFYVDPEAKLLFIIRI----RGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRG-YGKLDKQ----RIA-LTDNSIIEKALG-KFGIICMEDLIHEIMTVGPHFKEANNFLWPF 714
            PE +L+K+K N+   L     A++++LE  KKN   S+K +  RA+     +   E      K + + ++++   K+      D  AKLLFIIRI    +G+  +  K +K+L LLRL +   GVF+K+  AT+ +L  + PY+  G P+L S+R+L  KR     +D++    RI  L +N ++E   G   G IC+EDLIHE+ T+G HFK  +N++ PF
Sbjct:    8 PEILLRKRKNNDRKRLEKQEQARQRQLEQKKKNDQRSKKFV--RAETLVSNYKSNELENKRIKHITKFEKQSQADKISQAKEDDESAKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFKTVSNWILPF 226          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RL7_ENCCU (60S ribosomal protein L7 OS=Encephalitozoon cuniculi GN=RPL7 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.970e-25
Identity = 65/234 (27.78%), Postives = 129/234 (55.13%), Query Frame = 1
Query:  124 PESVLKKQKRNEEWALAKKQELETSKKNKLESRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPFXXXXXXXXXXXXRN-HYVEGGDAGNRENYVNELIRRM 822
            P+S ++K++     +  + ++ +  ++ K  + +      ++   ++ EQE+ +  L++++ +K GFYV  EA+   +I IR      PK +K+L+L RL++I   V ++ NK+T  ML  ++ +V +G   ++ +R+L+Y +G G+    R+ LT+  I +   GK  I C+E+L+H I      FK+ N+FL+PF            ++  + +GG  GN ++ ++ L+ RM
Sbjct:    9 PQSSIRKKEYEARMSRIRSRQEKEFRERKSANARYAEETTEKLLNKYYEQEREI--LEKKSSMKNGFYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSPPRGGFKGQKSKSFNDGGSVGNHQDLLSNLLERM 238          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.727e-23
Identity = 81/235 (34.47%), Postives = 116/235 (49.36%), Query Frame = 1
Query:  109 AKAPVPESVLKKQKRNEEWA---------LAKKQELETSKKNKLESRKLIYNRAKQYA--KEF----------AEQEKVLIQLKREAK----LKGGFYVDPEAKLLFIIRIRGINAIDPKTK--KILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGY------GKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPF 714
            AK    E + KK+    ++          LA  +E E  K+  +   K   N  +  A  K+F          AE+  V ++   E +    ++     D +  LLFI+R+RG  A++   K  KIL LLRL +   GVF+K+ K    +L  + PYV  G P+L S+R LI KRG        + +   I L DN+I+E+ LG  GIIC+ED+IHEI T+G  F   N FL PF
Sbjct:   37 AKKKREEQIKKKRSNKNKFVRAESIVAKTLATSREKERIKRVSILEDKKAKNETQHIASGKDFILKITEKANGAEENSVDLEETEEEEDDGLIREKTTYDGKPALLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPF 271          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RLP7_KLULA (Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis GN=RLP7 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.727e-23
Identity = 74/204 (36.27%), Postives = 107/204 (52.45%), Query Frame = 1
Query:  157 EEWALAKKQELETSK-KNKLE----SRKLIYNRAKQYAKEFAEQEKVLIQLKREAKLKGGFY-----VDPEAKLLFIIRIRGINA--IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGY------GKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPF 714
            E+  + + ++LE  K KN L      R  I   +++ A   A  E  L  +  E +   G        D E  LLF+IR++G  A  I  K  K+L LLRL ++  GVF+K+ K    +L  V PY+  G P+L S+R LI KR           + + I L DN+I+E+ LG  G+IC+ED+IHEI T+G +F +   FL PF
Sbjct:   64 EKTRIRRVRDLENQKVKNDLSHIPSDRDFILRISEREAGSKATSESELQDVDEEDEEDDGLIREKIVYDGEPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPF 267          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.076e-23
Identity = 83/253 (32.81%), Postives = 128/253 (50.59%), Query Frame = 1
Query:  124 PESVLKKQKRNEEWALAKKQEL-----ETSKKNKLESRKLIYNRAKQYAKEFA---EQEKVLIQLKRE-AKLKG---------GFYV------------------------------DPEAKLLFIIRIRGINA--IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRG---YGKLDKQR---IALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPF 714
            PE +L+K +RN +    +KQEL     E  KK +++++K         A   A   E+E++    K E  KLKG          F++                              + E +LLF++R++G  A  I  K  +IL  LRL ++   VF+K+ + T ++L  + PYV  G P+LKS+R LI KR    Y + D++    I L DN+I+E+ LG  G+IC++D+IHEI T+G +F + N FL PF
Sbjct:   15 PEILLRK-RRNADRTRLEKQELARQRQEQRKKEQIKNKKKFIRAESLVANSLATSREKERIKRISKLEHKKLKGDVSHLPSEKNFFLKVTEKPQSEETDDLIDEDEEDGFEREKVAYNGEEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQPF 266          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RLP7_ASHGO (Ribosome biogenesis protein RLP7 OS=Ashbya gossypii GN=RLP7 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.076e-23
Identity = 78/236 (33.05%), Postives = 113/236 (47.88%), Query Frame = 1
Query:  124 PESVLKKQKRNEEWALAKKQELETSK------KNKLESRKLIYNRAKQYAKEFAEQEKVLIQL--KREAKLKGGFYV-----------------------DPEAKLLFIIRIRGINA--IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGY------GKLDKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPF 714
            PE +L+K +RN E    +KQE    +      + +    K +   A   +    E+EK  IQ   KR AK + G                          D  A LLF++R+RG  A  I  K  ++L LLRL ++  GVF+++      +L  V PYV  G P+L S+R L+ KR        G+     + L DN ++E+ LG  G+IC+ED+IHEI T+G  F + N FL PF
Sbjct:    8 PEILLRK-RRNAERTRVEKQEAARRRAEAEVRQRRARQHKFVRAEALVASTLATEREKTRIQRVSKRAAKQRAGHVTGGEWLVRVRAAADGGLEREKTAYDGRATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCNFFLLPF 242          
BLAST of GO241776 vs. ExPASy Swiss-Prot
Match: RLP7_PICJA (Ribosome biogenesis protein RLP7 (Fragment) OS=Pichia jadinii GN=RLP7 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.506e-17
Identity = 50/131 (38.17%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  346 LLFIIRIRG-INA-IDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKL------DKQRIALTDNSIIEKALGKFGIICMEDLIHEIMTVGPHFKEANNFLWPF 714
            L  I+R  G + A I  K +K+LQLLRL +I +GVF+K+ +    +L  + PY     P+L++VR+L+ KR    +      + +++ L DN+++E+ LG  GIIC+ED+IHE   +   FK   +FL PF
Sbjct:   32 LYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVTHFLDPF 162          
The following BLAST results are available for this feature:
BLAST of GO241776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
RLP7_DEBHA3.806e-2535.59Ribosome biogenesis protein RLP7 OS=Debaryomyces h... [more]
RL7_ENCCU4.970e-2527.7860S ribosomal protein L7 OS=Encephalitozoon cunicu... [more]
RLP7_YEAST2.727e-2334.47Ribosome biogenesis protein RLP7 OS=Saccharomyces ... [more]
RLP7_KLULA2.727e-2336.27Ribosome biogenesis protein RLP7 OS=Kluyveromyces ... [more]
RLP7_CANGA6.076e-2332.81Ribosome biogenesis protein RLP7 OS=Candida glabra... [more]
RLP7_ASHGO6.076e-2333.05Ribosome biogenesis protein RLP7 OS=Ashbya gossypi... [more]
RLP7_PICJA6.506e-1738.17Ribosome biogenesis protein RLP7 (Fragment) OS=Pic... [more]

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Properties
Property NameValue
Genbank description424 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 560 5, mRNA sequence.