GO241732

Overview
NameGO241732
Unique NameGO241732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241732 vs. ExPASy Swiss-Prot
Match: TCPZ_MOUSE (T-complex protein 1 subunit zeta OS=Mus musculus GN=Cct6a PE=1 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 1.840e-32
Identity = 98/289 (33.91%), Postives = 147/289 (50.87%), Query Frame = 1
Query:    4 RKDVNLDLIKVE-GKVGGRLE-DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQK--------CKDVG-ATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPVETLSAVK 837
            +KD  +DL  VE  ++  + E DT LI G+ +D    HP M KR+ENA I       E  K +        + E+ + L + E+K+ +D V+K        C D     +VI Q G D  +   L    + A+R      +E + +A GG  +  F +L P+ LG AGLV E + G  +++  +IE C N R+VT+ ++G NK  + + K +I D L   +N I +  +V G GA E+A + A+        G  Q  ++AFADAL  IP  LA+NSG    ETL  V+
Sbjct:  181 KKDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIVALRRAKRRNMERLTLACGGIALNSFDDLNPDCLGHAGLVYEYTLG--EEKFTFIEKCNNPRSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVALAEALIKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQ 467          
BLAST of GO241732 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.840e-32
Identity = 86/278 (30.94%), Postives = 140/278 (50.36%), Query Frame = 1
Query:   13 VNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPVETLSAVK 837
            + L +I ++   GG LED++L+ G+   K  S+      PK+ ++ KIA+L    E    K   +V ++TVE +Q +   E     D + K    GA +V+ +    D A      R++     V   +L+   +A GG I      L+ + LG+  L  E   G   DR  +   C  ++  TI +RGG +  +EET+RS+HDA+ + R  I+N+S+V GGGA E+  S  +   +   PG +Q  I A+A AL+ IP  L +N+G      L+ ++
Sbjct:  190 LQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYQSPKIALLNVELELKAEKDNAEVRVNTVEDYQAIVDAEWNILYDKLDKIHKSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSDDVLGRCELFEEIQIGG--DRYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLR 465          
BLAST of GO241732 vs. ExPASy Swiss-Prot
Match: TCPZ_PONAB (T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 3.139e-32
Identity = 95/290 (32.76%), Postives = 150/290 (51.72%), Query Frame = 1
Query:    1 ERKDVNLDLIKVE-GKVGGRLE-DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQK--------CKDVG-ATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPVETLSAVK 837
            +++D  +DL  +E  ++  + E DT LI G+ +D    HP M KR+E+A I       E  K +        + E+ + L + E+K+ +D V+K        C D     +VI Q G D  +   L    + A+R      +E + +A GG  +  F +L+P++LG AGLV E + G  +++  +IE C N R+VT+ I+G NK  + + K ++ D L   RN I +  +V G GA E+A + A+        G  Q  ++AFADAL  IP  LA+NSG    ETL  ++
Sbjct:  180 KKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDQLGHAGLVYEYTLG--EEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVRNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQ 467          
BLAST of GO241732 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.139e-32
Identity = 83/278 (29.86%), Postives = 139/278 (50.00%), Query Frame = 1
Query:   13 VNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPVETLSAVK 837
            + L +I ++   GG LE+++L+ G+   K  S+      PK+ +N KIA+L    E    K   ++ + TVE +Q +   E     D ++K    GA +++ +    D A      R++     V   +L+   +A GG I      L P+ LG   +  E   G   +R  +   C  ++  TI +RGG +  +EET+RS+HDA+ + R  I+N+S+V GGGA E+  S  +   +   PG +Q  I A+A AL+ IP  L +N+G      L+ ++
Sbjct:  190 LQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYKNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHQSGAKVILSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALVPDVLGHCQVFEETQIGG--ERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLR 465          
BLAST of GO241732 vs. ExPASy Swiss-Prot
Match: TCPH_YEAST (T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae GN=CCT7 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.100e-32
Identity = 82/282 (29.08%), Postives = 140/282 (49.65%), Query Frame = 1
Query:    1 ERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPVETLSAVK 837
            +R D++  LI ++   GG +E++  I G+   K  S+    Q PK+  N KI  L    E    K   +V ++ VE +Q +   E +   + +++ ++ GA +V+ +    D A      RN+     V   ++  +  A GG I     ++ PE LG   L  E   G+  +R    + C  ++  T+ +RGG + +I E +RS+HDA+ + +  ++N  IV GGGA E+  S  +   +    G +Q  I AFA AL+ IP  L EN+G   +E L+ ++
Sbjct:  190 DRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGS--ERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLR 469          
BLAST of GO241732 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.193e-31
Identity = 83/278 (29.86%), Postives = 138/278 (49.64%), Query Frame = 1
Query:   13 VNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPVETLSAVK 837
            + L +I ++   GG LED++L+ G+   K  S+      PK+  N KIA+L    E    K   ++ + TVE +Q +   E     D ++K    GA +V+ +    D A      R++     V   +L+   +A GG I      L+ + LG+  +  E   G   +R  +   C  ++  T  +RGG +  +EET+RS+HDA+ + R  I+N+S+V GGGA E+  S  +   +   PG +Q  I A+A AL+ IP  L +N+G      L+ ++
Sbjct:  190 LQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGG--ERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLR 465          
BLAST of GO241732 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.558e-31
Identity = 82/278 (29.50%), Postives = 138/278 (49.64%), Query Frame = 1
Query:   13 VNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPVETLSAVK 837
            + L +I ++   GG LED++L+ G+   K  S+      PK+  N K+A+L    E    K   ++ + TVE +Q +   E     D ++K    GA +V+ +    D A      R++     V   +L+   +A GG I      L+ + LG+  +  E   G   +R  +   C  ++  T  +RGG +  +EET+RS+HDA+ + R  I+N+S+V GGGA E+  S  +   +   PG +Q  I A+A AL+ IP  L +N+G      L+ ++
Sbjct:  190 LQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKVALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGG--ERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLR 465          
BLAST of GO241732 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.035e-31
Identity = 79/268 (29.48%), Postives = 137/268 (51.12%), Query Frame = 1
Query:   22 DLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPVETL 825
            D ++V  + G     TEL+ G+ +DK+  +  MP+ + +A +A+L    +  K +   + +I +V++       E        +   D G  +V C    DD     L    + A + V   +   +A ATG + +    +L    LG+   V  +SFG   D + ++E  A ++AVT+F+RGG + ++ E +R+I DA+ V    I    +V G GA EIA +  + + A    G +Q A+ A+ADA++A+P  LAEN+G+ P++ L
Sbjct:  196 DDVRVLTRTGASSSATELVEGVVLDKEPVNENMPRSVSDATVAVLDMKLDVRKSEVDTEYNITSVDQLTAAIDAEDSELRGYAKALADAGVDVVFCTKSIDDRVAGFLADAGILAFKSVKKSDARALARATGAKRLGSLSDLDESDLGRVDAVSIRSFG--DDDLAFVEGGAAAKAVTLFLRGGTEHVVYELERAIEDAVDVVVAAIDKGGVVPGAGATEIAIADRIRSEAAGIEGRKQLAVEAYADAVEALPRTLAENTGMDPIDAL 461          
BLAST of GO241732 vs. ExPASy Swiss-Prot
Match: TCPZ_HUMAN (T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 2.035e-31
Identity = 94/290 (32.41%), Postives = 149/290 (51.38%), Query Frame = 1
Query:    1 ERKDVNLDLIKVE-GKVGGRLE-DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQK--------CKDVG-ATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPVETLSAVK 837
            +++D  +DL  +E  ++  + E DT LI G+ +D    HP M KR+E+A I       E  K +        + E+ + L + E+K+ +D V+K        C D     +VI Q G D  +   L    + A+R      +E + +A GG  +  F +L+P+ LG AGLV E + G  +++  +IE C N R+VT+ I+G NK  + + K ++ D L   +N I +  +V G GA E+A + A+        G  Q  ++AFADAL  IP  LA+NSG    ETL  ++
Sbjct:  180 KKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLG--EEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQ 467          
BLAST of GO241732 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 3.471e-31
Identity = 86/275 (31.27%), Postives = 140/275 (50.91%), Query Frame = 1
Query:   16 NLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKT-KHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPVETLSAVK 837
            NL+ I V  K+GG L D+ L  G  +DK +   Q PKRIENAKI I     +  K K    +V +D+  K   +   E++   + V++    G    I +    +    L     + A+     V +E +A+ TGG I   F      KLG   L+ E   G  +D++++    A   A TI +RG  + +++E +RS+HDALCV    ++++  VYGGG +E+  + AV   A R PG E  A+ ++A AL  +P  +A+N+G    + ++ ++
Sbjct:  195 NLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQ-PKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIG--EDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLR 466          
The following BLAST results are available for this feature:
BLAST of GO241732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
TCPZ_MOUSE1.840e-3233.91T-complex protein 1 subunit zeta OS=Mus musculus G... [more]
TCPH_CHICK1.840e-3230.94T-complex protein 1 subunit eta OS=Gallus gallus G... [more]
TCPZ_PONAB3.139e-3232.76T-complex protein 1 subunit zeta OS=Pongo abelii G... [more]
TCPH_MOUSE3.139e-3229.86T-complex protein 1 subunit eta OS=Mus musculus GN... [more]
TCPH_YEAST4.100e-3229.08T-complex protein 1 subunit eta OS=Saccharomyces c... [more]
TCPH_HUMAN1.193e-3129.86T-complex protein 1 subunit eta OS=Homo sapiens GN... [more]
TCPH_PONAB1.558e-3129.50T-complex protein 1 subunit eta OS=Pongo abelii GN... [more]
THS3_HALVO2.035e-3129.48Thermosome subunit 3 OS=Halobacterium volcanii GN=... [more]
TCPZ_HUMAN2.035e-3132.41T-complex protein 1 subunit zeta OS=Homo sapiens G... [more]
TCPB_BOVIN3.471e-3131.27T-complex protein 1 subunit beta OS=Bos taurus GN=... [more]

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Properties
Property NameValue
Genbank description380 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 511 5, mRNA sequence.