GO241695

Overview
NameGO241695
Unique NameGO241695
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241695 vs. ExPASy Swiss-Prot
Match: Y461_VIBCH (UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0461 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.667e-39
Identity = 101/236 (42.80%), Postives = 140/236 (59.32%), Query Frame = 2
Query:  116 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDD-----LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTI--GMPDYTSTPENFKTLAKCRSEVCKALGIPEEQCD-LSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPK 799
            +  +  ++  A ++  R    ++++AVSKTKPV  I +  +AG R FGENYVQE V+K     +      LEWHFIG LQSNK + +     +   V ++D EKIA RL+     +   PL+VL+QVNTSGE SKSG+EP     L + +S+  PNL   GLM+I   +PDY +    F  LA+ + ++ +       Q D LSMGMSGD + AIE GST VRIG+ IFG R+Y +
Sbjct:    8 IEHITAQIESAQQKCGRARSSVQLLAVSKTKPVEAILEATQAGQRYFGENYVQEGVDKIRYFAEHHPQLALEWHFIGPLQSNKTRLV---AEHFDWVHTIDREKIALRLSEQ-RPVNMPPLQVLIQVNTSGEASKSGIEPQQLFTLAELISR-LPNLTLRGLMSIPENVPDYPAQLAAFTQLAELQQQLAQKY----PQIDTLSMGMSGDMQAAIEAGSTIVRIGTAIFGERDYSR 234          
BLAST of GO241695 vs. ExPASy Swiss-Prot
Match: Y274_AQUAE (UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_274 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.496e-37
Identity = 95/231 (41.13%), Postives = 137/231 (59.31%), Query Frame = 2
Query:  116 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPEN----FKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREY 793
            L  V++R+ +A ER+ R  +  +++  SKT P  VIR+ Y  G + +GEN VQE ++K   L D DLEWHFIG LQ+NKVK L+  V    ++ S+D + +A  + +           VL++VN  GEE+K GVEP    EL ++  +  PN++  GLMTI  P Y   PE+    F+ L + R E+ +   +      LSMGMS DFE+AIE G+T VRIG+ +FG R+Y
Sbjct:    7 LSRVLERIQKACERAGRGENCAKLLGASKTVPPEVIREFYNCGLKVYGENRVQEFLKKYEALKDLDLEWHFIGRLQTNKVKYLMGKV---VLIHSLDRKNLADEIQKRA-FKNNIVQDVLIEVNVGGEETKGGVEPENLKELFEYTLE-LPNVKVLGLMTI--PPYLENPEDVRPYFRKLRELRDELQREYNVALPH--LSMGMSHDFEVAIEEGATIVRIGTLLFGERKY 228          
BLAST of GO241695 vs. ExPASy Swiss-Prot
Match: Y394_PSEAE (UPF0001 protein PA0394 OS=Pseudomonas aeruginosa GN=PA0394 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.760e-36
Identity = 99/228 (43.42%), Postives = 130/228 (57.02%), Query Frame = 2
Query:  116 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKA-LGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREY 793
            +  V  R+ +AA+ + R P  + ++AVSKTKP + +R+ + AG R FGENY+QE + K A+L D  L WHFIG +QSNK +P+     +   V SVD  KIA RL+      G  PL V +QVN SGE SKSG  P     L + V Q  PNL   GLM I  P      ++    A+ R  +    LG+      LSMGMS D E AI  G+T VRIG+ +FGAR+Y
Sbjct:    8 IAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQ-LPNLRLRGLMAIPEPTAERAAQH-AAFARLRELLLDLNLGLD----TLSMGMSDDLEAAIGEGATWVRIGTALFGARDY 225          
BLAST of GO241695 vs. ExPASy Swiss-Prot
Match: YBD6_YEAST (UPF0001 protein YBL036C OS=Saccharomyces cerevisiae GN=YBL036C PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.051e-35
Identity = 98/218 (44.95%), Postives = 132/218 (60.55%), Query Frame = 2
Query:  176 RIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLN--RMVETMGRKPLKVLVQVNTSGEESKSGV-EPSGCLELVK-HVSQNCPNLEFCGLMTIGM--PDYTSTPEN--FKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKKN 805
            +I ++ VSK KP S I+ +Y+ G R FGENYVQE++EKA  LPDD++WHFIG LQ+NK K  LA VPNL  VE++D+ K A +LN  R        P+   VQ+NTS E+ KSG+   +   E++   +S+ C  ++  GLMTIG     +  + EN  F TL + + ++    G       LSMGMS DF  AI  G+  VRIG+ IFGAR  P KN
Sbjct:   41 KILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPDDIKWHFIGGLQTNKCKD-LAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAEIFEVIDFFLSEECKYIKLNGLMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFG---TSLKLSMGMSADFREAIRQGTAEVRIGTDIFGAR--PPKN 252          
BLAST of GO241695 vs. ExPASy Swiss-Prot
Match: YGGS_ECOLI (UPF0001 protein yggS OS=Escherichia coli (strain K12) GN=yggS PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.856e-33
Identity = 97/236 (41.10%), Postives = 125/236 (52.97%), Query Frame = 2
Query:  116 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKALGIPEEQ---CDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 802
            L  V  ++  AA R  R P+ I ++AVSKTKP S I +  +AG R FGENYVQE V+K     +     LEWHFIG LQSNK + +     +     ++D  +IA RLN         PL VL+Q+N S E SKSG++ +   EL   V++  P L   GLM I  P+     E  +     R       G+         LS+GMS D E AI  GST VRIG+ IFGAR+Y KK
Sbjct:    8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE----SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK 234          
BLAST of GO241695 vs. ExPASy Swiss-Prot
Match: YGGS_ECOL6 (UPF0001 protein yggS OS=Escherichia coli O6 GN=yggS PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.856e-33
Identity = 97/236 (41.10%), Postives = 125/236 (52.97%), Query Frame = 2
Query:  116 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKALGIPEEQ---CDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 802
            L  V  ++  AA R  R P+ I ++AVSKTKP S I +  +AG R FGENYVQE V+K     +     LEWHFIG LQSNK + +     +     ++D  +IA RLN         PL VL+Q+N S E SKSG++ +   EL   V++  P L   GLM I  P+     E  +     R       G+         LS+GMS D E AI  GST VRIG+ IFGAR+Y KK
Sbjct:    8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE----SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK 234          
BLAST of GO241695 vs. ExPASy Swiss-Prot
Match: YGGS_ECO57 (UPF0001 protein yggS OS=Escherichia coli O157:H7 GN=yggS PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.856e-33
Identity = 97/236 (41.10%), Postives = 125/236 (52.97%), Query Frame = 2
Query:  116 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD----DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCKALGIPEEQ---CDLSMGMSGDFELAIEMGSTNVRIGSTIFGAREYPKK 802
            L  V  ++  AA R  R P+ I ++AVSKTKP S I +  +AG R FGENYVQE V+K     +     LEWHFIG LQSNK + +     +     ++D  +IA RLN         PL VL+Q+N S E SKSG++ +   EL   V++  P L   GLM I  P+     E  +     R       G+         LS+GMS D E AI  GST VRIG+ IFGAR+Y KK
Sbjct:    8 LAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLV---AEHFDWCHTIDRLRIATRLNDQ-RPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAE-LPRLRLRGLMAIPAPE----SEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSKK 234          
BLAST of GO241695 vs. ExPASy Swiss-Prot
Match: Y395_HELPJ (UPF0001 protein jhp_0986 OS=Helicobacter pylori J99 GN=jhp_0986 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.502e-29
Identity = 84/203 (41.38%), Postives = 114/203 (56.16%), Query Frame = 2
Query:  179 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIG--MPDYTSTPENFKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIF 778
            ++IVAVSK      I+  Y    R FGEN VQ++  K   L    LEWH IG+LQ NK+  LL+  P  A++ S+D+ K+A ++ +  E +G   L  L+QVN++ EESKSGV P   LE    +S+ C  L+  GLM IG    D T   ++F T  K   ++  A         LSMGMS DFELAI  G+  +RIGS +F
Sbjct:   28 VKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKIKMHSLEHLPLEWHMIGSLQENKINALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALETYSQISETCKRLKLKGLMCIGAHTDDETKIEKSFTTTKKLFDQIKNA-------SVLSMGMSDDFELAIACGANLLRIGSFLF 220          
BLAST of GO241695 vs. ExPASy Swiss-Prot
Match: Y395_HELPY (UPF0001 protein HP_0395 OS=Helicobacter pylori GN=HP_0395 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.268e-29
Identity = 87/222 (39.19%), Postives = 124/222 (55.86%), Query Frame = 2
Query:  122 SVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIG--MPDYTSTPENFKTLAKCRSEVCKALGIPEEQCDLSMGMSGDFELAIEMGSTNVRIGSTIF 778
            ++I ++ +A    SR    ++IVAVSK      I+  Y    R FGEN VQ++  K   L    LEWH IG+LQ NK+  LL+  P  A++ S+D+ K+A ++ +  E +G   L  L+QVN++ EESKSGV P   LE+   +S+ C +L+  GLM IG    D     ++F T  K   ++  A         LSMGMS DFELAI  G+  +RIGS +F
Sbjct:   10 ALITKIEKARTAYSRH-HIVKIVAVSKNASPEAIQHYYNCSQRAFGENKVQDLKTKMHSLEHLPLEWHMIGSLQENKINALLSLKP--ALLHSLDSLKLALKIEKRCEILGVN-LNALLQVNSAYEESKSGVVPEEALEIYSQISETCKHLKLKGLMCIGAHTDDEKEIEKSFITTKKLFDQIKNA-------SVLSMGMSDDFELAIACGANLLRIGSFLF 220          
BLAST of GO241695 vs. ExPASy Swiss-Prot
Match: YLME_BACSU (UPF0001 protein ylmE OS=Bacillus subtilis GN=ylmE PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.059e-27
Identity = 78/225 (34.67%), Postives = 125/225 (55.56%), Query Frame = 2
Query:  116 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPNLEFCGLMTIG--MPDYTSTPENFKTLAKCRSEVCKALGIPEEQC-DLSMGMSGDFELAIEMGSTNVRIGSTIFG 781
            LR + +R+++A  RS R  D + ++AV+K       ++  +AG  C GEN   E++ K   +  + EWHFIG+LQS K K +   V +++ + S+D   +A    + +E      ++  VQVNTS E SK G++    +  ++ +S    ++   GLMT+     D       F++L + R +V K L  P   C +LSMGMS DFE+AIE G+T +RIGS++ G
Sbjct:    7 LRHINERINEACNRSGRSSDEVTVIAVTKYVSPERAQEAVDAGITCLGENRDAELLRKQELMKGNPEWHFIGSLQSRKAKSV---VNSVSYIHSLDRLSLA----KEIEKRAEGTVRCFVQVNTSLEPSKHGMKKEEVIPFIQELS-GFEHILVAGLMTMAPLTDDQDQIRSCFRSLRELRDQVQK-LNQPNAPCTELSMGMSNDFEIAIEEGATYIRIGSSLVG 222          
The following BLAST results are available for this feature:
BLAST of GO241695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
Y461_VIBCH2.667e-3942.80UPF0001 protein VC_0461 OS=Vibrio cholerae GN=VC_0... [more]
Y274_AQUAE2.496e-3741.13UPF0001 protein aq_274 OS=Aquifex aeolicus GN=aq_2... [more]
Y394_PSEAE2.760e-3643.42UPF0001 protein PA0394 OS=Pseudomonas aeruginosa G... [more]
YBD6_YEAST3.051e-3544.95UPF0001 protein YBL036C OS=Saccharomyces cerevisia... [more]
YGGS_ECOLI2.856e-3341.10UPF0001 protein yggS OS=Escherichia coli (strain K... [more]
YGGS_ECOL62.856e-3341.10UPF0001 protein yggS OS=Escherichia coli O6 GN=ygg... [more]
YGGS_ECO572.856e-3341.10UPF0001 protein yggS OS=Escherichia coli O157:H7 G... [more]
Y395_HELPJ2.502e-2941.38UPF0001 protein jhp_0986 OS=Helicobacter pylori J9... [more]
Y395_HELPY3.268e-2939.19UPF0001 protein HP_0395 OS=Helicobacter pylori GN=... [more]
YLME_BACSU3.059e-2734.67UPF0001 protein ylmE OS=Bacillus subtilis GN=ylmE ... [more]

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Properties
Property NameValue
Genbank description343 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 472 5, mRNA sequence.