GO241690

Overview
NameGO241690
Unique NameGO241690
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241690 vs. ExPASy Swiss-Prot
Match: RL5_PYRKO (50S ribosomal protein L5P OS=Pyrococcus kodakaraensis GN=rpl5p PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.894e-32
Identity = 75/170 (44.12%), Postives = 108/170 (63.53%), Query Frame = 3
Query:   99 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKED----AMKWFQVKYEGV 593
            ++PMR+ ++ K+ +NI VGESG+RLT+A  +LEQL GQ P+  +A+ T R FGIRR E IA  VT+RG+KA Q+L+  L+  + +L   NF + G F FGIQEHI++ G++YDP  GI+GMD  V LE                  +H++TKE+    AM+  + K EG+
Sbjct:   14 AHPMRKPRIAKVTINIGVGESGERLTKAETMLEQLVGQKPIRRRAKQTNRDFGIRRGEPIAVKVTLRGEKAYQMLDRLLEAVDRKLKASNFDEHGNFCFGIQEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVAKRKRQRRKIPTKHKLTKEEGIVFAMEELKAKVEGL 183          
BLAST of GO241690 vs. ExPASy Swiss-Prot
Match: RL5_PYRHO (50S ribosomal protein L5P OS=Pyrococcus horikoshii GN=rpl5p PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30
Identity = 68/163 (41.72%), Postives = 103/163 (63.19%), Query Frame = 3
Query:   99 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 584
            ++PMR  ++QK+ +NI VGESG+RLT+A  +L++L+GQ P+  KA+ T R FGIRR E IA  VT+RG KA ++L+  L   +Y+L   +F + G   FGI+EHI++ G++YDP  GI+GMD  V LE                  +H++TKE+ M +   ++
Sbjct:   17 AHPMRRPRIQKVTINIGVGESGERLTKAEIMLQRLTGQKPIRRKAKKTNRDFGIRRGEPIAVKVTLRGPKAYEMLKRLLAAVDYKLKASSFDEHGNVCFGIEEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVARRKRKRARIPTRHKLTKEEGMLYMMEEF 179          
BLAST of GO241690 vs. ExPASy Swiss-Prot
Match: RL5_SULSO (50S ribosomal protein L5P OS=Sulfolobus solfataricus GN=rpl5p PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.452e-29
Identity = 65/159 (40.88%), Postives = 100/159 (62.89%), Query Frame = 3
Query:  102 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQ 575
            NPMR++K+ K+ +NI +GESGDRL +A ++L++L+G  PV++ ++ T+R FGIR+ ++I   VT+RG +A + L   L+   Y L + +F D G   FGI EH+ L G +YDP  GI+GMD  + LE                  +HRVTKE+AM++ +
Sbjct:   14 NPMRKVKLSKVTVNIGLGESGDRLQKAYQLLQELTGAKPVYTISKKTIREFGIRKGQEIGVKVTLRGAQAEEFLRKVLEAIGYRLKKSSFDDYGNVSFGIAEHVILPGARYDPEIGIFGMDIAITLERAGYRISRRRRKKAKIPKRHRVTKEEAMEFLR 172          
BLAST of GO241690 vs. ExPASy Swiss-Prot
Match: RL5_METJA (50S ribosomal protein L5P OS=Methanocaldococcus jannaschii GN=rpl5p PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.452e-29
Identity = 75/178 (42.13%), Postives = 107/178 (60.11%), Query Frame = 3
Query:  102 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYE---LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAM----KWFQVKYEGVILNKSQ 611
            NPM + +++K+V+N  VGESGDRLT+ A+V+E+L+GQ P+ ++A+ T  SFGIR+   I   VT+RG KA + L++  +  + E   L   +F D G F FGI EHID  G KYDP  GI+GMD  V LE                  +HR+T+E+A+    K F VK E V+L + +
Sbjct:   10 NPMLKPRIEKVVVNFGVGESGDRLTKGAQVIEELTGQKPIRTRAKQTNPSFGIRKKLPIGLKVTLRGKKAEEFLKNAFEAFQKEGKKLYDYSFDDYGNFSFGIHEHIDFPGQKYDPMIGIFGMDVCVTLERPGFRVKRRKRCRAKIPRRHRLTREEAIEFIEKTFGVKVERVLLEEEE 187          
BLAST of GO241690 vs. ExPASy Swiss-Prot
Match: RL5_PYRFU (50S ribosomal protein L5P OS=Pyrococcus furiosus GN=rpl5p PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.202e-29
Identity = 68/163 (41.72%), Postives = 101/163 (61.96%), Query Frame = 3
Query:   99 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 584
            ++PMR  +++K+ +NI VGESG+RLT+A  +L+QL+GQ P+  KA+ T R FGIRR E IA  VT+RG KA +LL+  L   +  L   +F + G   FGI+EHI++ G++YDP  GI+GMD  V LE                  +H++TKE+ M +   ++
Sbjct:   17 AHPMRRPRIEKVTINIGVGESGERLTKAEIMLQQLTGQKPIRRKAKKTNRDFGIRRGEPIAVKVTLRGPKAYELLKRLLAAVDNRLKASSFDEHGNVCFGIEEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVARRKRKRAKIPTRHKLTKEEGMVYMMEEF 179          
BLAST of GO241690 vs. ExPASy Swiss-Prot
Match: RL5_PYRAB (50S ribosomal protein L5P OS=Pyrococcus abyssi GN=rpl5p PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.318e-29
Identity = 67/163 (41.10%), Postives = 101/163 (61.96%), Query Frame = 3
Query:   99 SNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 584
            ++PMR+ +++K+ +NI VGESG+RLT+A  +LE+L+GQ P+  KA+ T R FGIRR E IA  VT+RG KA ++L+  L   +  L   +F + G   FGI EHI++ G++YDP  GI+GMD  V LE                  +H++TKE+ M +   ++
Sbjct:   17 AHPMRKPRIEKVTINIGVGESGERLTKAEIMLERLTGQKPIRRKAKKTNRDFGIRRGEPIAVKVTLRGPKAYEMLKRLLAAVDNRLKASSFDEHGNVCFGIDEHINIPGVEYDPEIGIFGMDVCVTLERPGFRVARRKRKRAKIPTRHKLTKEEGMVYMMEEF 179          
BLAST of GO241690 vs. ExPASy Swiss-Prot
Match: RL5_AERPE (50S ribosomal protein L5P OS=Aeropyrum pernix GN=rpl5p PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.076e-28
Identity = 65/156 (41.67%), Postives = 98/156 (62.82%), Query Frame = 3
Query:  102 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLE-XXXXXXXXXXXXXXXXXIQHRVTKEDAM 563
            +PMR  ++ K+ +NIS+G+SG+RL RAA+VLE+L+GQ PVF KA+ T+R+FG+R+ E IA  VT+RG+KA+  L+  L    + +   +  + G   FGI+EHI + G+KYDP  GI GMD  + ++                   +HRVT+E+ M
Sbjct:   25 SPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENIAVMVTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILGMDVAITIQRPGHRIVERRRQRRGHIPRRHRVTREETM 180          
BLAST of GO241690 vs. ExPASy Swiss-Prot
Match: RL5_METKA (50S ribosomal protein L5P OS=Methanopyrus kandleri GN=rpl5p PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28
Identity = 69/184 (37.50%), Postives = 109/184 (59.24%), Query Frame = 3
Query:   51 AVTHHQQTRMASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 599
            +V   +  R   E   SNPMR+ +V K+ +NI VGESGDRL +A ++L++L+GQ PV+++A+ T  SFGIRR + I   V +R ++A++ L+  L   + EL    F + G   FG++EHI L G++YDP  GI+GMD  V LE                  +HR+TKE+ + + + +++  +L
Sbjct:    2 SVVDEETRRKILEDWESNPMRKPRVGKVTVNIGVGESGDRLQKAYELLQELTGQKPVYTRAKQTNPSFGIRRGQPIGVKVDLRREQAIEFLDWTLDAVDRELHESQFDEFGNVCFGLEEHIALEGVEYDPEIGIFGMDIAVTLERPGFRVMRRRRCRRPVPRRHRLTKEEGIVFMEEEFDVEVL 185          
BLAST of GO241690 vs. ExPASy Swiss-Prot
Match: RL5_METMP (50S ribosomal protein L5P OS=Methanococcus maripaludis GN=rpl5p PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.030e-27
Identity = 68/171 (39.77%), Postives = 100/171 (58.48%), Query Frame = 3
Query:  105 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNK 605
            PM++ ++QK+ +N  VGE+GDRLT  AKV+E+L+GQ+PV + A+ T  +FGIR+   I   VT+RG KA + L+   +  K     L   +F   G F FG+ EHID  G KYDPS GIYGMD  V  E                  +H VTK++A+++ Q K++  ++ +
Sbjct:   11 PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPIGLKVTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVGIYGMDICVTFEKSGYRVKSRKVKRSHIPEKHLVTKDEAIEYIQAKFDTEVVRE 181          
BLAST of GO241690 vs. ExPASy Swiss-Prot
Match: RL5_METBU (50S ribosomal protein L5P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl5p PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.345e-27
Identity = 66/164 (40.24%), Postives = 96/164 (58.54%), Query Frame = 3
Query:   96 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKY 584
            +SNPMR  KV+K+V+++ VGESG  L  A  +LE ++GQT V S A+ T+ +F I++ E I C VT+RG+ A   LE+ L + E  L    F   G   FG++EH D  G++YDP+ GI+GMD  VV+                    H++TKED + +F+ KY
Sbjct:    1 MSNPMRNPKVEKVVVHMGVGESGQHLVDAEGILETITGQTVVRSYAKRTLPAFTIKKGEPIGCKVTLRGEAAEGFLETSLGIVEKRLNESQFDIFGNVSFGVEEHTDYPGMRYDPNIGIFGMDITVVVNRPGYRVSKRRIAKRKIPTSHKITKEDTISFFKDKY 164          
The following BLAST results are available for this feature:
BLAST of GO241690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
RL5_PYRKO6.894e-3244.1250S ribosomal protein L5P OS=Pyrococcus kodakaraen... [more]
RL5_PYRHO4.941e-3041.7250S ribosomal protein L5P OS=Pyrococcus horikoshii... [more]
RL5_SULSO2.452e-2940.8850S ribosomal protein L5P OS=Sulfolobus solfataric... [more]
RL5_METJA2.452e-2942.1350S ribosomal protein L5P OS=Methanocaldococcus ja... [more]
RL5_PYRFU3.202e-2941.7250S ribosomal protein L5P OS=Pyrococcus furiosus G... [more]
RL5_PYRAB9.318e-2941.1050S ribosomal protein L5P OS=Pyrococcus abyssi GN=... [more]
RL5_AERPE2.076e-2841.6750S ribosomal protein L5P OS=Aeropyrum pernix GN=r... [more]
RL5_METKA3.541e-2837.5050S ribosomal protein L5P OS=Methanopyrus kandleri... [more]
RL5_METMP1.030e-2739.7750S ribosomal protein L5P OS=Methanococcus maripal... [more]
RL5_METBU1.345e-2740.2450S ribosomal protein L5P OS=Methanococcoides burt... [more]

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Properties
Property NameValue
Genbank description338 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 467 5, mRNA sequence.