GO241680

Overview
NameGO241680
Unique NameGO241680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNJB6_RAT (DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNP-GDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI-----PQDSMVDAAAVFGMIFGS--EYFEDYIG 532
            YY+VLGV   ASP +IKKAY  +A   HPDKNP    +A + F+ + EAY+VLSD +KR+ YDK+GKEG+        S  D+   FG  F +  + F ++ G
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKQALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGGSHFDSPFEFGFTFRNPDDVFREFFG 106          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_SHESR (Chaperone protein dnaJ OS=Shewanella sp. (strain MR-7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQD----SMVDAAAVFGMIFGSEYFEDYIG 532
            YY+VLGV  DAS  EIKKAY   A   HPD+NPGD  A  +F+ + EAY++L+D  K+ AYD+ G  G+  +         A  FG IFG + F D  G
Sbjct:    6 YYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDANKKAAYDQFGHAGVDPNRGGGGGYGGAGDFGDIFG-DVFGDIFG 103          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_SHESM (Chaperone protein dnaJ OS=Shewanella sp. (strain MR-4) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQD----SMVDAAAVFGMIFGSEYFEDYIG 532
            YY+VLGV  DAS  EIKKAY   A   HPD+NPGD  A  +F+ + EAY++L+D  K+ AYD+ G  G+  +         A  FG IFG + F D  G
Sbjct:    6 YYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDANKKAAYDQFGHAGVDPNRGGGGGYGGAGDFGDIFG-DVFGDIFG 103          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_SHESA (Chaperone protein dnaJ OS=Shewanella sp. (strain ANA-3) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQD----SMVDAAAVFGMIFGSEYFEDYIG 532
            YY+VLGV  DAS  EIKKAY   A   HPD+NPGD  A  +F+ + EAY++L+D  K+ AYD+ G  G+  +         A  FG IFG + F D  G
Sbjct:    6 YYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDANKKAAYDQFGHAGVDPNRGGGGGYGGAGDFGDIFG-DVFGDIFG 103          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEON (Chaperone protein dnaJ OS=Shewanella oneidensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQD----SMVDAAAVFGMIFGSEYFEDYIG 532
            YY+VLGV  DAS  EIKKAY   A   HPD+NPGD  A  +F+ + EAY++L+D  K+ AYD+ G  G+  +         A  FG IFG + F D  G
Sbjct:    6 YYEVLGVGRDASEREIKKAYKRLAMKFHPDRNPGDKAAEASFKEVKEAYEILTDANKKAAYDQFGHAGVDPNRGGGGGYGGAGDFGDIFG-DVFGDIFG 103          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEPW (Chaperone protein dnaJ OS=Pseudomonas putida (strain W619) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAAVFG-----MIFGSEYFEDYIG 532
            YY+VLGV   AS A++KKAY   A   HPD+NPGD ++   F+   EAY+VLSD  KR A+D++G  G+   SM    A FG      IFG + F D+ G
Sbjct:    6 YYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGHAGV-DPSMGGGGAGFGGANFSDIFG-DVFSDFFG 103          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEPG (Chaperone protein dnaJ OS=Pseudomonas putida (strain GB-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAAVFG-----MIFGSEYFEDYIG 532
            YY+VLGV   AS A++KKAY   A   HPD+NPGD ++   F+   EAY+VLSD  KR A+D++G  G+   SM    A FG      IFG + F D+ G
Sbjct:    6 YYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGHAGV-DPSMGGGGAGFGGANFSDIFG-DVFSDFFG 103          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_NITOC (Chaperone protein dnaJ OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 47/105 (44.76%), Postives = 59/105 (56.19%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI-------PQDSMVDAAAVFGMIFGSEYFEDYIGQLA 541
            YY+ LGV  +AS AEIKKAY   A   HPD+NP D  A ++F+ + EAY VLSD  KR AYD+ G  G+       P     +  + FG IFG + F D  G  A
Sbjct:    6 YYEALGVARNASDAEIKKAYRRLAMRYHPDRNPDDKAAEEHFKEIQEAYDVLSDARKRTAYDQFGHAGVGAGASAGPGGHGFEGGSNFGDIFG-DVFNDIFGAAA 109          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_NITEU (Chaperone protein dnaJ OS=Nitrosomonas europaea GN=dnaJ PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAAVFGMIFGSEYFEDYIG 532
            YY+VLGV  DA   E+KKAY   A   HPD+N GD KA + F+ + EAY++LSDP KR AYD+ G  G+        A  F   F S+ F D  G
Sbjct:    6 YYEVLGVGRDADENELKKAYRKLAMKYHPDRNAGDTKAEERFKNIKEAYEILSDPNKRAAYDQFGHAGLNGGMGGAGAQGFSDAF-SDIFSDLFG 99          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_MARMS (Chaperone protein dnaJ OS=Marinomonas sp. (strain MWYL1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAA-------VFGMIFG 505
            YYDVLGV  DA   +IKKAY   A   HPDKNP +P+A   F+ L EAY++LS  +KR AYD+ G +G+   +     A       +FG +FG
Sbjct:    6 YYDVLGVAKDADKKDIKKAYRSLANKYHPDKNPDNPEALDKFKELAEAYEILSSDDKRAAYDRFGHDGVNGQAGGYGGAGAGGFSDIFGDVFG 98          
The following BLAST results are available for this feature:
BLAST of GO241680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJB6_RAT1.883e-1444.66DnaJ homolog subfamily B member 6 OS=Rattus norveg... [more]
DNAJ_SHESR1.883e-1445.45Chaperone protein dnaJ OS=Shewanella sp. (strain M... [more]
DNAJ_SHESM1.883e-1445.45Chaperone protein dnaJ OS=Shewanella sp. (strain M... [more]
DNAJ_SHESA1.883e-1445.45Chaperone protein dnaJ OS=Shewanella sp. (strain A... [more]
DNAJ_SHEON1.883e-1445.45Chaperone protein dnaJ OS=Shewanella oneidensis GN... [more]
DNAJ_PSEPW1.883e-1446.00Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]
DNAJ_PSEPG1.883e-1446.00Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]
DNAJ_NITOC1.883e-1444.76Chaperone protein dnaJ OS=Nitrosococcus oceani (st... [more]
DNAJ_NITEU1.883e-1446.32Chaperone protein dnaJ OS=Nitrosomonas europaea GN... [more]
DNAJ_MARMS1.883e-1445.16Chaperone protein dnaJ OS=Marinomonas sp. (strain ... [more]

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Properties
Property NameValue
Genbank description328 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 457 5, mRNA sequence.