GO241680

Overview
NameGO241680
Unique NameGO241680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_AGRVS (Chaperone protein dnaJ OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14
Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAAVFGMIFG--SEYFEDYIGQL 538
            +Y+ LGV+  A   E+K A+   A   HPDKNPGD ++ + F+ + EAY+ L DP+KR AYD+ G     Q  M  A    G   G  S+ FED  G++
Sbjct:    6 FYETLGVSKTADEKELKSAFRKLAMKFHPDKNPGDAESERKFKEINEAYETLKDPQKRAAYDRFGHAAFEQGGMGSAGGGGGFAGGGFSDIFEDIFGEM 104          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14
Identity = 45/99 (45.45%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  227 AMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAA--VFGMIFGSEYF 517
            A V DT  YD+LGV   AS  E+KKAY   A+  HPDKN   P A   F+ +  AY+VLS+PEKRE YD++G++G+ + S        +F  IFG   F
Sbjct:    2 ANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKN---PNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLF 97          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14
Identity = 45/99 (45.45%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  227 AMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAA--VFGMIFGSEYF 517
            A V DT  YD+LGV   AS  E+KKAY   A+  HPDKN   P A   F+ +  AY+VLS+PEKRE YD++G++G+ + S        +F  IFG   F
Sbjct:    2 ANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKN---PNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLF 97          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14
Identity = 45/99 (45.45%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  227 AMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAA--VFGMIFGSEYF 517
            A V DT  YD+LGV   AS  E+KKAY   A+  HPDKN   P A   F+ +  AY+VLS+PEKRE YD++G++G+ + S        +F  IFG   F
Sbjct:    2 ANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKN---PNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLF 97          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14
Identity = 45/99 (45.45%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  227 AMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAA--VFGMIFGSEYF 517
            A V DT  YD+LGV   AS  E+KKAY   A+  HPDKN   P A   F+ +  AY+VLS+PEKRE YD++G++G+ + S        +F  IFG   F
Sbjct:    2 ANVADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKN---PNAGDKFKEISFAYEVLSNPEKRELYDRYGEQGLREGSGGGGGMDDIFSHIFGGGLF 97          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_SHEPW (Chaperone protein dnaJ OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQD------SMVDAAAVFGMIFG 505
            +Y+VLGV  DAS  E+KKAY   A   HPD+NPGD +A  +F+ + EAY++L+D +K+ AYD+ G  G+  +         D   VFG +FG
Sbjct:    6 FYEVLGVGRDASEREVKKAYKRLAMKFHPDRNPGDKEAEASFKEVKEAYEILTDSDKKAAYDQFGHAGVDPNRGGGGHGGADFGDVFGDVFG 97          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEMY (Chaperone protein dnaJ OS=Pseudomonas mendocina (strain ymp) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14
Identity = 46/100 (46.00%), Postives = 57/100 (57.00%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAAVFG-----MIFGSEYFEDYIG 532
            YY+VLGV   AS AE+KKAY   A   HPD+NP D  A + F+   EAY+VLSD  KR AYD++G  G+         A FG      IFG + F D+ G
Sbjct:    6 YYEVLGVERGASEAELKKAYRRLAMKYHPDRNPDDKGAEEKFKEANEAYEVLSDAGKRSAYDQYGHAGVDPQMGGGGGAGFGGANFSDIFG-DVFSDFFG 104          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOD6 (Chaperone protein dnaJ OS=Clostridium difficile (strain 630) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14
Identity = 43/98 (43.88%), Postives = 57/98 (58.16%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI-PQDSMVDAAAVFGMIFGSEYFEDYIGQL 538
            YY+VLG++  A   EIKKAY   A   HPD+NPGD +A + F+ + EAY+VLSD  KR+ YD+ G +G+  Q          G  FG   FED  G +
Sbjct:    7 YYEVLGISKGAEAQEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEINEAYEVLSDDTKRKTYDQFGHDGLNGQGGFGGQGGFGGQGFGG--FEDMFGDI 102          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14
Identity = 44/99 (44.44%), Postives = 58/99 (58.59%), Query Frame = 2
Query:  230 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIP---QDSMVDAAAVFGMIFGSEYF 517
            MVK+T  Y+VL V+V AS AE+KKAY   A   HPDKN   P A   F+ +  AY++L+D EKR  YD+ G+EG+     D  + A  +F   FG   F
Sbjct:    1 MVKETKLYEVLNVDVTASQAELKKAYRKLALKYHPDKN---PNAGDKFKEISRAYEILADEEKRATYDRFGEEGLQGGGADGGMSADDLFASFFGGGMF 96          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14
Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 2
Query:  194 LFGRKSSGEKKAMVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQ-----DSMVDAAAVFGMIFGSEYF 517
            +FGR     KK+   +T YY+VLGV+ +A+P ++KKAY   A   HPDK  GDP+    F+ +G+AY+VL+DPEKRE YD++G+EG+ +       + D   +F   FG   F
Sbjct:    1 MFGR---APKKS--DNTKYYEVLGVSKNATPEDLKKAYRKAAIKNHPDKG-GDPE---KFKEIGQAYEVLNDPEKREIYDQYGEEGLKEGMGGGGGVHDPFDIFQSFFGGGGF 104          
The following BLAST results are available for this feature:
BLAST of GO241680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_AGRVS1.883e-1440.40Chaperone protein dnaJ OS=Agrobacterium vitis (str... [more]
DNJA2_RAT2.460e-1445.45DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE2.460e-1445.45DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_HUMAN2.460e-1445.45DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN2.460e-1445.45DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNAJ_SHEPW2.460e-1443.48Chaperone protein dnaJ OS=Shewanella piezotolerans... [more]
DNAJ_PSEMY2.460e-1446.00Chaperone protein dnaJ OS=Pseudomonas mendocina (s... [more]
DNAJ_CLOD62.460e-1443.88Chaperone protein dnaJ OS=Clostridium difficile (s... [more]
MAS5_SCHPO3.213e-1444.44Mitochondrial protein import protein mas5 OS=Schiz... [more]
DNJH2_ALLPO3.213e-1442.48DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]

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Properties
Property NameValue
Genbank description328 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 457 5, mRNA sequence.