GO241677
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241677 vs. ExPASy Swiss-Prot
Match: RL10A_MACFA (60S ribosomal protein L10a OS=Macaca fascicularis GN=RPL10A PE=2 SV=3) HSP 1 Score: 215.312 bits (547), Expect = 2.236e-55 Identity = 103/195 (52.82%), Postives = 141/195 (72.31%), Query Frame = 3 Query: 66 SKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 650 SK+ D L EA+ ++ + + +R F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK VC+LGD QH +EA+ + + +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+ +TH E++ +KV+E K+T+KFQ+K+VLC+ VAVG++ M + ++ N+ ++VNFLVSLLKK Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSPLTHNENMVAKVDEVKSTIKFQMKRVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKK 196
BLAST of GO241677 vs. ExPASy Swiss-Prot
Match: RL10A_CHLRE (60S ribosomal protein L10a OS=Chlamydomonas reinhardtii GN=RPL10A PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.236e-55 Identity = 114/196 (58.16%), Postives = 142/196 (72.45%), Query Frame = 3 Query: 63 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 650 MSK+ +D LRE++S++V+ +K T R F ET+ELQIGLKNYDPQKDKRFSGSV+LP +PRP+M+V GD +H E+A IG+D VE YHAFLAS+SVIKQIPRLLGPGLNKAGKFP + ++LE V +TK ++KFQLKKVLCMGVAV N+ M E +I N+ ++NFLVSLLKK Sbjct: 1 MSKISNDVLRESVSALVEGAK-TKPRKFQETVELQIGLKNYDPQKDKRFSGSVRLPFVPRPRMRV-RAGDVKHCEQAGAIGVDAKGVEDLKKLNKNKKLVKKLAQAYHAFLASDSVIKQIPRLLGPGLNKAGKFPAPI--NKNLEEMVLDTKCSIKFQLKKVLCMGVAVANVGMTEGEIRTNIMYAINFLVSLLKK 192
BLAST of GO241677 vs. ExPASy Swiss-Prot
Match: RL10A_DICDI (60S ribosomal protein L10a OS=Dictyostelium discoideum GN=rpl10a PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.982e-55 Identity = 103/197 (52.28%), Postives = 142/197 (72.08%), Query Frame = 3 Query: 63 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXX-YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 650 MSK+ SD +R +S + + ++E+ KR F ET+ELQI LKNYD +KDKRFSG +K+ + +PK+ VC+ D QH +EA KIG ++MD+E Y AFLASES+++Q+P+LLGPGLNK GKFPTL+TH E + SK+N+ K+TVKFQLKKVLC+ VAVG++ + E+++ N+ S+NFLVSLLKK Sbjct: 1 MSKISSDQVRSIVSQLFKEAQES-KRGFLETVELQINLKNYDTKKDKRFSGQIKIGTVTKPKLSVCVFADQQHCDEATKIGAEFMDIEALKKIGPKNKKAIKKLSKKYDAFLASESILRQVPKLLGPGLNKVGKFPTLLTHSEDMASKINDVKSTVKFQLKKVLCLAVAVGHIELTEREVATNIIQSINFLVSLLKK 196
BLAST of GO241677 vs. ExPASy Swiss-Prot
Match: RL10A_TRYBR (60S ribosomal protein L10a OS=Trypanosoma brucei rhodesiense GN=RPL10A PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.027e-48 Identity = 101/196 (51.53%), Postives = 132/196 (67.35%), Query Frame = 3 Query: 63 MSKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 650 MSK+ L EAI ++++ KE R F E+I+LQ+ LKNYDPQKDKRFSGSV+LPH+ RP+M VC+L D H + A+K + M+ E Y AFL SES+IK +PRL+GP +++ GKFPT+ ESL KV E ++TVKFQLKKVLC+G VG++ M E Q+ QNV M++NFLVSLLKK Sbjct: 1 MSKIPPALLSEAIQNVLKDRKE---RKFKESIDLQVNLKNYDPQKDKRFSGSVRLPHVCRPRMTVCLLCDLVHEDIAKKNDVPTMNQEELKKLNKNKKLVKKMCNQYDAFLCSESIIKTVPRLVGPHMHRVGKFPTVCAQNESLPDKVLELQSTVKFQLKKVLCLGTCVGHVDMTEDQVRQNVVMAINFLVSLLKK 193
BLAST of GO241677 vs. ExPASy Swiss-Prot
Match: RL10A_PIG (60S ribosomal protein L10a (Fragment) OS=Sus scrofa GN=RPL10A PE=2 SV=3) HSP 1 Score: 178.333 bits (451), Expect = 3.029e-44 Identity = 87/164 (53.05%), Postives = 113/164 (68.90%), Query Frame = 3 Query: 66 SKLQSDALREAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCM 557 SK+ D L EA+ ++ + + N F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK VC LGD QH +EA+ + + +MD+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH + +KV+E K+ VKFQ+K+VLC+ Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRNXXKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCXLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNXDMVAKVDEVKSRVKFQMKEVLCL 165
BLAST of GO241677 vs. ExPASy Swiss-Prot
Match: RL10A_ENTHI (60S ribosomal protein L10a (Fragment) OS=Entamoeba histolytica GN=RPL10A PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.406e-33 Identity = 74/163 (45.40%), Postives = 101/163 (61.96%), Query Frame = 3 Query: 90 REAISSIVQYSKETNKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNL 578 R+ +++I+ KE +R F ET EL + LKNYDP KDKR G+ KLP++ + KVC+LGDAQ E A+K + +MDV+ Y+ FL S+SV +Q+ ++LGPGLNK GKFP + E L+ K+NE + V QLKKVLCMGV GN+ Sbjct: 6 RQGVATIL---KEKKERKFGETGELHLALKNYDPDKDKRCGGTDKLPNVTKANYKVCVLGDAQACEAAQKENIPHMDVDALKALYKDKMFFKKLARKYNTFLGSDSVGRQLQKILGPGLNKGGKFPPPLGKNEDLKVKINELQCQVNSQLKKVLCMGVGGGNV 165
BLAST of GO241677 vs. ExPASy Swiss-Prot
Match: RL10A_CAERE (60S ribosomal protein L10a (Fragment) OS=Caenorhabditis remanei GN=rpl-10a PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.192e-28 Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 210 SGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKK 545 SGS++L HIPRP MKVC+ GD H++EA + M + Y AF+ASES+IKQIPR+LGPGLNKAGKFP++VTH ESL+SK +E +ATVKFQ+KK Sbjct: 1 SGSIRLKHIPRPSMKVCVFGDQHHLDEAAAGNIPAMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKK 112
BLAST of GO241677 vs. ExPASy Swiss-Prot
Match: RL1_PYRKO (50S ribosomal protein L1P OS=Pyrococcus kodakaraensis GN=rpl1p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15 Identity = 50/189 (26.46%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 90 REAISSIVQYSKETNKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLV-THQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 650 ++ + ++ + RNFT+T+E+ + LK+ D +K + RF V LPH + K+ ++ D E A+K+GLD + E Y F+A+ ++ +I R LG L K P +V +LE V + K TV+ QLK + +G M+++++ +N + +N +++ L++ Sbjct: 6 QKLVEAVKEAKARAKPRNFTQTVEMAVNLKDVDLRKPENRFKLEVVLPHGRGKEPKIAVIADGAVAEAAKKLGLDVISGEELEELAKSPRQARKLAKKYDFFIAAAPLMPKIGRYLGRYLGPRNKMPVVVPPTMTNLEPIVEKLKKTVRIQLKNNPVVHAPIGTEDMDDEKLAENAEAVLNAIINKLER 194
BLAST of GO241677 vs. ExPASy Swiss-Prot
Match: RL1_PYRAB (50S ribosomal protein L1P OS=Pyrococcus abyssi GN=rpl1p PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.501e-14 Identity = 56/199 (28.14%), Postives = 97/199 (48.74%), Query Frame = 3 Query: 63 MSKLQSDALREAISSIVQYSKETNK-RNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLV-THQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 650 MS++ D R+ I V+ +K K RNFT+++E+ + LK+ D ++ + RF V LPH +K+ ++ D E A ++GLD + Y F+A ++ +I R LG L K P +V +LE V + K TV+ QLK + VG M +++I +N++ +N ++ L++ Sbjct: 1 MSRMPFD--RQKIVEAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARRLGLDVISSAELEEIAQSPRQARKLAKKYDFFIAEAPLMPKIGRYLGKYLGPRNKMPVVVPPTMSNLEPIVEKLKKTVRIQLKNNPVVHAPVGTEKMSDEEIAENIETVLNAIIGKLER 197
BLAST of GO241677 vs. ExPASy Swiss-Prot
Match: RL1_PYRHO (50S ribosomal protein L1P OS=Pyrococcus horikoshii GN=rpl1p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14 Identity = 55/199 (27.64%), Postives = 97/199 (48.74%), Query Frame = 3 Query: 63 MSKLQSDALREAISSIVQYSKETNK-RNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLV-THQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKK 650 MS++ D R+ I V+ +K K RNFT+++E+ + LK+ D ++ + RF V LPH +K+ ++ D E A ++GLD + Y F+A ++ +I R LG L K P +V ++E V + K TV+ QLK + VG M ++Q+ +N++ +N ++ L++ Sbjct: 1 MSRMAFD--RQKIVEAVKEAKARAKPRNFTQSVEVAVNLKDIDLKRPENRFKLEVVLPHGRGKDVKIAVIADGAVAEAARRLGLDVISSAELEEIAKSPRQARKLAKKYDFFIAEAPLMPKIGRYLGRYLGPRNKMPVVVPPTMTNIEPIVEKLKKTVRIQLKDNPVVHAPVGTEKMSDEQLAENIEAVLNAIIGKLER 197 The following BLAST results are available for this feature:
BLAST of GO241677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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