GO241625

Overview
NameGO241625
Unique NameGO241625
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241625 vs. ExPASy Swiss-Prot
Match: RS7_METTP (30S ribosomal protein S7P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps7p PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.154e-38
Identity = 79/189 (41.80%), Postives = 126/189 (66.67%), Query Frame = 1
Query:   31 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMTHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDXIERVAKANR 597
            +K+F +W   +V++ D+S+  YI ++       V HT GR++ ++F+K++  +VERL N +M   +N G+K +A RIV+ A +IIH  T +NP+ V+V A+ N+GPRE+  R+   G+   +AVD +P RRV+ A+ LI  GA +++F++ ++I  CLADE+I AA     S+A+ +KD IERVAKA R
Sbjct:    1 MKVFGKWDASEVEIPDLSVKGYINLKPR----IVLHTGGRHAKQQFKKSELHVVERLINKMMRKEKNTGQKQIAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITVPKAVDTAPQRRVDTALMLIAKGAWQASFKSRRSIQNCLADEIIAAANYDVKSFAVSRKDSIERVAKAAR 185          
BLAST of GO241625 vs. ExPASy Swiss-Prot
Match: RS7_METMA (30S ribosomal protein S7P OS=Methanosarcina mazei GN=rps7p PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.813e-38
Identity = 79/188 (42.02%), Postives = 124/188 (65.96%), Query Frame = 1
Query:   34 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMTHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDXIERVAKANR 597
            K+F +W   +V+V D+ +  Y+ +        VPH++G+++ ++F K++  IVERL N+LM    N GKK + +R V+ A +II+  T QNPIQ++VDA+ N+GPRE+  R+   G+   +AVD +P RRV+ A+  I+ G   +AF++ +++AECLA ELI AA   + S++I +KD  ERVAKA R
Sbjct:    6 KIFGKWDPTEVEVRDLGIKRYVSLAPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189          
BLAST of GO241625 vs. ExPASy Swiss-Prot
Match: RS7_METAC (30S ribosomal protein S7P OS=Methanosarcina acetivorans GN=rps7p PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.674e-38
Identity = 79/188 (42.02%), Postives = 124/188 (65.96%), Query Frame = 1
Query:   34 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMTHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDXIERVAKANR 597
            K+F +W   +V+V D+ +  Y+ +        VPH++G+++ ++F K++  IVERL N+LM    N GKK + +R V+ A +I++  T QNPIQV+VDA+ N+GPRE+  R+   G+   +AVD +P RRV+ A+  I+ G   +AF++ +++AECLA ELI AA   + S++I +KD  ERVAKA R
Sbjct:    6 KIFGKWDPTEVEVKDLGIKRYVSLTPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLATELIGAANRDTKSFSINRKDAKERVAKAAR 189          
BLAST of GO241625 vs. ExPASy Swiss-Prot
Match: RS7_METVS (30S ribosomal protein S7P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps7p PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 4.798e-38
Identity = 86/191 (45.03%), Postives = 122/191 (63.87%), Query Frame = 1
Query:   28 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMTHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDXIERVAKANR 597
            ++KLF +W    V V D SL  +I +    +   +PHTAGR S K F K +  +VERL N LM    N GKK   + I++ A+ I+   T +NPIQV+VDA+ NSGPRE+ TRI   G+   Q+VD+SP RR++ A   I+ GA + A ++ K+IA+CLADEL+ A+K     S+A+KKK+  ERVA++ R
Sbjct:    8 EIKLFGKWDSTSVTVKDPSLKSHISL----NPVLIPHTAGRNSKKMFDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKKKEEKERVAQSAR 194          
BLAST of GO241625 vs. ExPASy Swiss-Prot
Match: RS7_METBF (30S ribosomal protein S7P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps7p PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.798e-38
Identity = 80/189 (42.33%), Postives = 123/189 (65.08%), Query Frame = 1
Query:   31 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMTHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDXIERVAKANR 597
            +K+F +W   +V+V D+ +  Y+ +        VPH++G+++ ++F K++  IVERL N+LM    N GKK   +R V+ A +I+   T QNPIQV+VDA+ N+GPRE+  R+   G+   +AVD +P RRV+ A+  I+ G   +AF++ +++AECLA ELI AA   + S+AI +KD  ERVAKA R
Sbjct:    1 MKIFGKWDPTEVEVRDLGIKRYVSLTPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTEINTGKKQKTLRAVEEAFDIVSKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNNAAFKSKRSVAECLATELIGAANRDTKSFAINRKDAKERVAKAAR 185          
BLAST of GO241625 vs. ExPASy Swiss-Prot
Match: RS7_METBU (30S ribosomal protein S7P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps7p PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.069e-37
Identity = 78/188 (41.49%), Postives = 125/188 (66.49%), Query Frame = 1
Query:   34 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMTHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDXIERVAKANR 597
            KLF +W   +V+V D  +  Y+ +        VPHT+G+++ ++F K+   IVERL N++M + +N GKK +A+RIV  A +I++  T +NP+QV+V+AV N+GPRE+  R+   G+   +AVD +P RRV+ A+  I+ G+ ++AF++ ++ AECLA ELI A+   +  ++I +KD  ERVAKA R
Sbjct:    3 KLFGKWDLTEVEVADAGIKRYVNLDPV----IVPHTSGKHARQQFNKSDITIVERLVNNVMRNAQNTGKKQIALRIVDEAFDIVNSKTKKNPVQVLVEAVSNAGPREEVVRLKYGGISVPKAVDTAPQRRVDHALRNISIGSNQTAFKSKRSAAECLASELIAASNRDAKCFSINRKDGKERVAKAAR 186          
BLAST of GO241625 vs. ExPASy Swiss-Prot
Match: RS7_METHJ (30S ribosomal protein S7P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps7p PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 6.928e-37
Identity = 80/187 (42.78%), Postives = 117/187 (62.57%), Query Frame = 1
Query:   37 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMTHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDXIERVAKANR 597
            LFNRW   +V + D  ++ Y+ +    ++  VPH+ GR + + F KA   IVERL N LM    N GKK +A+RIV+ A EI+H  T +NPI+V+ DAV N+GPRE+  R+   G+   ++VD +P+RRVN A+ LI  G   ++ +  K +A  LA+ELI AA G    Y++ K++  ERVAK+ R
Sbjct:   12 LFNRWDTSEVTIRDPGIARYVNL----NSMMVPHSCGRLTRQEFHKANMLIVERLINQLMRTEVNTGKKQLAIRIVRDAFEIVHQKTKKNPIEVLCDAVANAGPREETVRLKYGGINVPKSVDTAPMRRVNTAVGLIAAGVYSASHKKKKPVANALAEELIAAANGDVKCYSVAKREERERVAKSAR 194          
BLAST of GO241625 vs. ExPASy Swiss-Prot
Match: RS7_HALMA (30S ribosomal protein S7P OS=Haloarcula marismortui GN=rps7p PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.016e-36
Identity = 82/188 (43.62%), Postives = 113/188 (60.11%), Query Frame = 1
Query:   34 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMTHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDXIERVAKANR 597
            KLF  W   D++ +D S   YI V      T + HT GR++ K+F+K++  IVERL N LM    N GKK +A  IV  A E++H  TD+NPIQV+V AV NS PRE+  R+   G+   +AVD++P RRV+QA+  +  G    +F+   T AE LA +LI AA     +YA+ +K+  ERVA A R
Sbjct:   25 KLFGEWDITDIEYSDPSTERYITV------TPIAHTMGRHADKQFKKSEISIVERLINRLMQTDENTGKKQLATSIVTEAFELVHERTDENPIQVLVSAVENSAPREETVRLKYGGISVPKAVDVAPQRRVDQALKFLAEGVYGGSFKTTTTAAEALAQQLIGAANDDVQTYAVNQKEEKERVAAAAR 206          
BLAST of GO241625 vs. ExPASy Swiss-Prot
Match: RS7_HALSA (30S ribosomal protein S7P OS=Halobacterium salinarium GN=rps7p PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.633e-36
Identity = 84/199 (42.21%), Postives = 120/199 (60.30%), Query Frame = 1
Query:    1 SQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMTHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDXIERVAKANR 597
            S+D  +   + KLF +W   ++   D S   Y+ V      T V HT GR++ K+F+K++  IVERL N LM  G N GKK  A++IV+ A +I+H  TD+NPIQV+V AV N+ PRE+  R+   G+   QAVD +P RRV+QA+  +  GA  ++F+     AE LA++L  AA  +  +YAI +K   ERVA A R
Sbjct:   18 SEDTQEVAANAKLFGKWDVAEIHYEDPSTRRYLAV------TPVAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALANQLAGAADYNVQTYAIGQKKEKERVAAAAR 210          
BLAST of GO241625 vs. ExPASy Swiss-Prot
Match: RS7_THEGJ (30S ribosomal protein S7P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps7p PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.865e-36
Identity = 87/206 (42.23%), Postives = 120/206 (58.25%), Query Frame = 1
Query:   28 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMTHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDXIERVAKANR 597
            ++K+F RW+ EDV VND SL  YI ++       +PH+ GR++ K F KAQ  IVERL N +M  G ++                 KK+ A  +VK A  II   T QNPIQV++ A+ NS PRED T I   G+    AVD+SPLRR++ A+  I  GA    +RN  T A+ LA+E+I AA     S+A  KK+ IER+A+++R
Sbjct:   14 ELKVFGRWSVEDVTVNDPSLRPYIALEPR----ILPHSHGRHAKKPFGKAQVHIVERLINKVMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQNPIQVLIRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDVALKNIALGASIKCYRNKTTYAQALAEEIIAAANRDPKSFAYSKKEEIERIAQSSR 215          
The following BLAST results are available for this feature:
BLAST of GO241625 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
RS7_METTP2.154e-3841.8030S ribosomal protein S7P OS=Methanosaeta thermoph... [more]
RS7_METMA2.813e-3842.0230S ribosomal protein S7P OS=Methanosarcina mazei ... [more]
RS7_METAC3.674e-3842.0230S ribosomal protein S7P OS=Methanosarcina acetiv... [more]
RS7_METVS4.798e-3845.0330S ribosomal protein S7P OS=Methanococcus vanniel... [more]
RS7_METBF4.798e-3842.3330S ribosomal protein S7P OS=Methanosarcina barker... [more]
RS7_METBU1.069e-3741.4930S ribosomal protein S7P OS=Methanococcoides burt... [more]
RS7_METHJ6.928e-3742.7830S ribosomal protein S7P OS=Methanospirillum hung... [more]
RS7_HALMA2.016e-3643.6230S ribosomal protein S7P OS=Haloarcula marismortu... [more]
RS7_HALSA2.633e-3642.2130S ribosomal protein S7P OS=Halobacterium salinar... [more]
RS7_THEGJ5.865e-3642.2330S ribosomal protein S7P OS=Thermococcus gammatol... [more]

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Properties
Property NameValue
Genbank description273 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 395 5, mRNA sequence.