GO241621
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_NITMS (50S ribosomal protein L5P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl5p PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.544e-22 Identity = 53/117 (45.30%), Postives = 80/117 (68.38%), Query Frame = 2 Query: 107 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI 454 +PM++I ++K+VLN+ VG+SGD + A++ LEQ+SG+ P A+ T R +G+R+ E I VT+RGD A LL+ L+ K + R F + G + FGI+EHID+ G+KY+PS GI Sbjct: 7 SPMKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEPIGVAVTIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGI 123
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_THEVO (50S ribosomal protein L5P OS=Thermoplasma volcanium GN=rpl5p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.903e-21 Identity = 58/126 (46.03%), Postives = 79/126 (62.70%), Query Frame = 2 Query: 107 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMDFPFV 481 N M+EI + K+V+NI VG++GDRLT+AAKVLE L+G P + A+ +VR F IR+ I VT+R D A+ L L VK+Y++ +F G FGI ++ D G+KYDP GI GMD V Sbjct: 2 NQMQEIIIDKVVVNIGVGQAGDRLTKAAKVLEMLTGHKPTQTLAKKSVRDFNIRKRLPIGVKVTLRKDDAVNFLNKALYVKDYKIPDYSFDKHGNAYFGISDYTDFKGMKYDPDIGI-FGMDVAIV 126
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_SULTO (50S ribosomal protein L5P OS=Sulfolobus tokodaii GN=rpl5p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.903e-21 Identity = 52/130 (40.00%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 83 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469 M +E + NPMR+++++K+ +NI VGE+G+RL +A ++L++L+G PV++ A+ T+R FG+R+ I VT+RG KA + L L + + +F + G FGI EH+ + G +YDP GI GMD Sbjct: 1 MMAETQTVNPMRKLRLEKVTVNIGVGEAGERLQKAYQLLQELTGVKPVYTIAKRTIREFGVRKGAPIGVKVTLRGKKAEEFLNKVLAAVGHRIKASSFDEYGNVSFGIAEHVLIPGTRYDPEIGI-FGMD 129
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_METMP (50S ribosomal protein L5P OS=Methanococcus maripaludis GN=rpl5p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.486e-21 Identity = 58/124 (46.77%), Postives = 79/124 (63.71%), Query Frame = 2 Query: 110 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469 PM++ ++QK+ +N VGE+GDRLT AKV+E+L+GQ+PV + A+ T +FGIR+ I VT+RG KA + L+ + K L +F G F FG+ EHID G KYDPS GI GMD Sbjct: 11 PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPIGLKVTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVGI-YGMD 133
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_METBU (50S ribosomal protein L5P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl5p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.486e-21 Identity = 57/128 (44.53%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 101 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMDFPFV 481 +SNPMR KV+K+V+++ VGESG L A +LE ++GQT V S A+ T+ +F I++ E I C VT+RG+ A LE+ L + E L F G FG++EH D G++YDP+ GI GMD V Sbjct: 1 MSNPMRNPKVEKVVVHMGVGESGQHLVDAEGILETITGQTVVRSYAKRTLPAFTIKKGEPIGCKVTLRGEAAEGFLETSLGIVEKRLNESQFDIFGNVSFGVEEHTDYPGMRYDPNIGI-FGMDITVV 127
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_PICTO (50S ribosomal protein L5P OS=Picrophilus torridus GN=rpl5p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.247e-21 Identity = 57/126 (45.24%), Postives = 76/126 (60.32%), Query Frame = 2 Query: 107 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMDFPFV 481 N MREI + K+V+NI VG +G+RL RAAKVLE L+ P F+ A+ TVR F IR+ I VT+R D A+ L+ K+Y++ +F G FGI ++ D G+KYDP GI GMD V Sbjct: 7 NSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKGLNIGVKVTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGI-FGMDIAIV 131
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_METBF (50S ribosomal protein L5P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl5p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.247e-21 Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 101 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMDFPFV 481 +SN MR V+K+++++ VGESG L A ++L ++GQ V A+ T+ +F I++NE I C VT+RG +A Q LE+ L + + L+R F G FGI+EH D G+KYDP+ G+ GMD V Sbjct: 1 MSNVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKKNEPIGCKVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGV-FGMDVTVV 127
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_THEAC (50S ribosomal protein L5P OS=Thermoplasma acidophilum GN=rpl5p PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.538e-21 Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 2 Query: 107 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMDFPFV 481 NPM E+ + K+V+NI VG++GDRLT+AAKVLE L+G + A+ ++R F IR+ I VT+R AM+ L+ VK+Y++ +F G FGI ++ D G+KYDP GI GMD V Sbjct: 2 NPMEEVIIDKVVVNIGVGQAGDRLTKAAKVLEMLTGHKATNTLAKKSIRDFNIRKRLPIGVKVTLRKKDAMEFLQKAFYVKDYKITDYSFDKHGNAYFGISDYTDFKGMKYDPDIGI-FGMDVAIV 126
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_METVS (50S ribosomal protein L5P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl5p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.233e-21 Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 2 Query: 110 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLES---GLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469 PM++ ++QK+ +N VGE+GDRLT AKV+E L+GQ PV + A+ T +FGIR+ I VT+RG A + LE+ KV L +F G F FG+ EHID G KYDP+ GI GMD Sbjct: 11 PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIETLTGQAPVRTLAKQTNPAFGIRKKLPIGLKVTLRGKNAEEFLENAFVAFKVSGKVLYASSFDKVGNFSFGVPEHIDFPGQKYDPTVGI-YGMD 133
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_METVA (50S ribosomal protein L5P OS=Methanococcus vannielii GN=rpl5p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.233e-21 Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 2 Query: 110 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLES---GLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469 PM++ ++QK+ +N VGE+GDRLT AKV+E L+GQ PV + A+ T +FGIR+ I VT+RG A + LE+ KV L +F G F FG+ EHID G KYDP+ GI GMD Sbjct: 11 PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIETLTGQAPVRTLAKQTNPAFGIRKKLPIGLKVTLRGKNAEEFLENAFVAFKVSGKVLYASSFDKVGNFSFGVPEHIDFPGQKYDPTVGI-YGMD 133 The following BLAST results are available for this feature:
BLAST of GO241621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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