GO241621

Overview
NameGO241621
Unique NameGO241621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_SULAC (50S ribosomal protein L5P OS=Sulfolobus acidocaldarius GN=rpl5p PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.039e-19
Identity = 49/127 (38.58%), Postives = 78/127 (61.42%), Query Frame = 2
Query:   92 EKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469
            E K  N MR + + K+ +NI VGESG+RL +A +++++L+G  PV++K R ++R FG+R+   I    T+R   A++ L+  L    + L + +F + G   FGI EH+ + G +YDP  GI  GMD
Sbjct:    5 EAKKENVMRRVVLDKVTVNIGVGESGERLQKAYQLVQELTGVKPVYTKGRKSIREFGVRKGAPIGVKATLRRQAAVEFLKKVLPAVNFRLKQSSFDNYGNVSFGIAEHVLIPGTRYDPEIGI-FGMD 130          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_METMJ (50S ribosomal protein L5P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl5p PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.969e-19
Identity = 50/120 (41.67%), Postives = 77/120 (64.17%), Query Frame = 2
Query:  113 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469
            M++I + K+V+++ VGESG+RL +A  +++Q++GQ PV + A+ T  +FGIR+   I C VT+R + A + + + L + E  L    F  TG   FGI+EH D  G+ YDP+ GI  GMD
Sbjct:    4 MKDIYIDKVVVHMGVGESGERLVKAEDLVKQITGQKPVRTIAKRTQPAFGIRKGAPIGCKVTLRRENAEKFITTALDIIERRLAPSQFDRTGNVSFGIEEHTDFPGMSYDPTIGI-YGMD 122          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_METB6 (50S ribosomal protein L5P OS=Methanoregula boonei (strain 6A8) GN=rpl5p PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.969e-19
Identity = 47/124 (37.90%), Postives = 75/124 (60.48%), Query Frame = 2
Query:  113 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMDFPFV 481
            MR++ + K+V+++ VGESG++L +A  +++ ++ QTP+ S A+ T  +F IR+   I C VT+RG  A   +++ L +    +    F  +G F FGI+EH D  G+ YDP  GI  GMD   V
Sbjct:    1 MRDVHIDKVVVHMGVGESGEKLVKAENIMKTITKQTPIRSVAKMTQPAFNIRKGAPIGCKVTLRGKPAEDFIKTSLNIVNKTIFESQFDKSGNFSFGIEEHTDFPGMSYDPQIGI-FGMDINVV 123          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_METLZ (50S ribosomal protein L5P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl5p PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19
Identity = 56/118 (47.46%), Postives = 72/118 (61.02%), Query Frame = 2
Query:  128 VQKLVLNISVGESGDRLTRAAKVLEQLS-GQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYE--LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469
            V K+V+++ VGE+G+RL  A  ++  L+ G  P+ S AR T+ +FGIR+ + I C  T+RG KAM  LE  LK    E  L  R F  TG FGFGI+EH D  G  YDP  GI  GMD
Sbjct:    9 VAKVVVHMGVGEAGERLVNAENIMADLTKGAKPIRSYARNTLPAFGIRKGQPIGCKATLRGKKAMDFLEMALKTYAVENVLHTRQFDATGNFGFGIEEHTDFPGQAYDPKIGI-YGMD 125          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_CALMQ (50S ribosomal protein L5P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl5p PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.485e-18
Identity = 47/117 (40.17%), Postives = 76/117 (64.96%), Query Frame = 2
Query:  107 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI 454
            +PMR I +  + +N+ +G+SG+RL +AAKV+ +L+G+TP +  A  +++ FGIRR E I   VT+R ++A+  L   L   ++ L   +F + G   FGI+EHI + G +YDP+ GI
Sbjct:   30 HPMRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLLVTLRRNEAVWFLLRALAAVDFTLREESF-NAGNVSFGIREHILVPGSRYDPALGI 145          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_META3 (50S ribosomal protein L5P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl5p PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.844e-17
Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 2
Query:  110 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469
            PM + +++K+ +N+ VGESGD+L  A KV+ +++GQ PV + A+ T  +F IR+   I   +T+RG KA + L+   +       +L   +F   G F FGI EHID    KYDPS GI  GMD
Sbjct:   11 PMSKPRIEKVTVNMGVGESGDKLLTAEKVVSEITGQKPVRTLAKQTNPAFNIRKKLPIGLKITLRGKKAEEFLKDAFTAFTASGKQLFTYSFDKRGNFSFGIPEHIDFPNQKYDPSVGI-YGMD 133          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_HALMA (50S ribosomal protein L5P OS=Haloarcula marismortui GN=rpl5p PE=1 SV=4)

HSP 1 Score: 85.5001 bits (210), Expect = 2.408e-16
Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 2
Query:  113 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469
            MRE +++K+V+++ +G  G  L  A  +L +++GQ PV +KA+ TV  F IR  + I   VT+R + A + L++ L +   EL    F DTG F FG++EH +    +YDPS GI  G+D
Sbjct:   14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLA--ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGI-YGLD 130          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_HALSA (50S ribosomal protein L5P OS=Halobacterium salinarium GN=rpl5p PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 4.107e-16
Identity = 48/120 (40.00%), Postives = 72/120 (60.00%), Query Frame = 2
Query:  113 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469
            MRE +++K+V+++ VG+ G  L  A  +LE ++GQ  V +KA+     FG+R+ + I   VT+R D A+  LE  L   + +  RR F +TG   FGI+EH D    +YDP+ GI  GMD
Sbjct:   12 MREPRIEKVVVHMGVGQGGVELQNAETILEAITGQQTVRTKAKSPEPEFGLRQGDPIGAKVTLRDDTAVDFLERALPAADLD--RRQFDNTGNVSFGIEEHTDFPSQEYDPNIGI-YGMD 128          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_HALS3 (50S ribosomal protein L5P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl5p PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.107e-16
Identity = 48/120 (40.00%), Postives = 72/120 (60.00%), Query Frame = 2
Query:  113 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469
            MRE +++K+V+++ VG+ G  L  A  +LE ++GQ  V +KA+     FG+R+ + I   VT+R D A+  LE  L   + +  RR F +TG   FGI+EH D    +YDP+ GI  GMD
Sbjct:   12 MREPRIEKVVVHMGVGQGGVELQNAETILEAITGQQTVRTKAKSPEPEFGLRQGDPIGAKVTLRDDTAVDFLERALPAADLD--RRQFDNTGNVSFGIEEHTDFPSQEYDPNIGI-YGMD 128          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL5_NATPD (50S ribosomal protein L5P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl5p PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.006e-16
Identity = 44/120 (36.67%), Postives = 75/120 (62.50%), Query Frame = 2
Query:  113 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGI*XGMD 469
            MRE  V+K+V+++ VG  G+ L +A ++LE++  Q PV + A+ T++ F +R  + I    T+RG+ A + LE+ L + + +  R+ F +TG F FG++EH +    +YDP  GI  G+D
Sbjct:   13 MREPTVEKVVVHMGVGRGGEPLAQAEEILEEIVEQQPVRTTAQKTIQDFEVREGDPIGTKATLRGEDAEEFLETALPLADID--RKQFDETGNFSFGVEEHTEFPSQEYDPQIGI-YGLD 129          
The following BLAST results are available for this feature:
BLAST of GO241621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
RL5_SULAC3.039e-1938.5850S ribosomal protein L5P OS=Sulfolobus acidocalda... [more]
RL5_METMJ3.969e-1941.6750S ribosomal protein L5P OS=Methanoculleus marisn... [more]
RL5_METB63.969e-1937.9050S ribosomal protein L5P OS=Methanoregula boonei ... [more]
RL5_METLZ6.770e-1947.4650S ribosomal protein L5P OS=Methanocorpusculum la... [more]
RL5_CALMQ7.485e-1840.1750S ribosomal protein L5P OS=Caldivirga maquilinge... [more]
RL5_META32.844e-1741.1350S ribosomal protein L5P OS=Methanococcus aeolicu... [more]
RL5_HALMA2.408e-1639.1750S ribosomal protein L5P OS=Haloarcula marismortu... [more]
RL5_HALSA4.107e-1640.0050S ribosomal protein L5P OS=Halobacterium salinar... [more]
RL5_HALS34.107e-1640.0050S ribosomal protein L5P OS=Halobacterium salinar... [more]
RL5_NATPD7.006e-1636.6750S ribosomal protein L5P OS=Natronomonas pharaoni... [more]

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Properties
Property NameValue
Genbank description269 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 391 5, mRNA sequence.