GO241618

Overview
NameGO241618
Unique NameGO241618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 50.8322 bits (120), Expect = 4.581e-11
Identity = 23/87 (26.44%), Postives = 48/87 (55.17%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLT 562
            +KF  +D+GG    R +W+ YY     ++++VD  D++R  E+++EL  +++D  + +     F  ++ +   +    E++  LGLT
Sbjct:   57 VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAM-KPHEIQEKLGLT 142          

HSP 2 Score: 35.8094 bits (81), Expect = 4.581e-11
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 1
Query:  166 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            KE +IL LGLD AGKTT+L+ LK  + V   PT
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPT 44          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 4.581e-11
Identity = 23/87 (26.44%), Postives = 48/87 (55.17%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLT 562
            +KF  +D+GG    R +W+ YY     ++++VD  D++R  E+++EL  +++D  + +     F  ++ +   +    E++  LGLT
Sbjct:   57 VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAM-KPHEIQEKLGLT 142          

HSP 2 Score: 35.8094 bits (81), Expect = 4.581e-11
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 1
Query:  166 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            KE +IL LGLD AGKTT+L+ LK  + V   PT
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPT 44          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2)

HSP 1 Score: 50.8322 bits (120), Expect = 4.581e-11
Identity = 23/87 (26.44%), Postives = 48/87 (55.17%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLT 562
            +KF  +D+GG    R +W+ YY     ++++VD  D++R  E+++EL  +++D  + +     F  ++ +   +    E++  LGLT
Sbjct:   57 VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAM-KPHEIQEKLGLT 142          

HSP 2 Score: 35.8094 bits (81), Expect = 4.581e-11
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 1
Query:  166 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            KE +IL LGLD AGKTT+L+ LK  + V   PT
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPT 44          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2)

HSP 1 Score: 50.8322 bits (120), Expect = 4.581e-11
Identity = 23/87 (26.44%), Postives = 48/87 (55.17%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLT 562
            +KF  +D+GG    R +W+ YY     ++++VD  D++R  E+++EL  +++D  + +     F  ++ +   +    E++  LGLT
Sbjct:   57 VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAM-KPHEIQEKLGLT 142          

HSP 2 Score: 35.8094 bits (81), Expect = 4.581e-11
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 1
Query:  166 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            KE +IL LGLD AGKTT+L+ LK  + V   PT
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPT 44          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3)

HSP 1 Score: 50.8322 bits (120), Expect = 4.581e-11
Identity = 23/87 (26.44%), Postives = 48/87 (55.17%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLT 562
            +KF  +D+GG    R +W+ YY     ++++VD  D++R  E+++EL  +++D  + +     F  ++ +   +    E++  LGLT
Sbjct:   57 VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAM-KPHEIQEKLGLT 142          

HSP 2 Score: 35.8094 bits (81), Expect = 4.581e-11
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 1
Query:  166 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            KE +IL LGLD AGKTT+L+ LK  + V   PT
Sbjct:   12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPT 44          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3)

HSP 1 Score: 50.0618 bits (118), Expect = 4.581e-11
Identity = 23/87 (26.44%), Postives = 47/87 (54.02%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLT 562
            +KF  +D+GG    R +W+ YY     ++++VD  D++R  E++ EL  +++D  + +     F  ++ +   +    E++  LGLT
Sbjct:   57 VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAM-KPHEIQEKLGLT 142          

HSP 2 Score: 36.5798 bits (83), Expect = 4.581e-11
Identity = 22/43 (51.16%), Postives = 26/43 (60.47%), Query Frame = 1
Query:  136 GILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            G L S     KE +IL LGLD AGKTT+L+ LK  + V   PT
Sbjct:    2 GKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPT 44          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL6_MOUSE (ADP-ribosylation factor-like protein 6 OS=Mus musculus GN=Arl6 PE=2 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 5.928e-11
Identity = 21/68 (30.88%), Postives = 35/68 (51.47%), Query Frame = 2
Query:  284 KLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFP 487
            K     + F  FD+ G    R +W+ YY    A+++++D+ DK R   +K ELD LL+   + +   P
Sbjct:   57 KFKSSSLSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIP 124          

HSP 2 Score: 38.5058 bits (88), Expect = 5.928e-11
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLK 234
            M L D   G+L   GL +KE  +L LGLDN+GKTT+++ LK
Sbjct:    1 MGLLDRLSGLL---GLKKKEVHVLCLGLDNSGKTTIINKLK 38          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF1_YEAST (ADP-ribosylation factor 1 OS=Saccharomyces cerevisiae GN=ARF1 PE=1 SV=3)

HSP 1 Score: 50.0618 bits (118), Expect = 5.938e-11
Identity = 19/68 (27.94%), Postives = 39/68 (57.35%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQK 505
            I F  +D+GG    R +W+ YY   + V+++VD+ D+ R  E++  +  +L+++ L N  +  F  ++
Sbjct:   61 ISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQ 128          

HSP 2 Score: 36.1946 bits (82), Expect = 5.938e-11
Identity = 19/43 (44.19%), Postives = 26/43 (60.47%), Query Frame = 1
Query:  166 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            KE +IL +GLD AGKTT+L+ LK   ++   PT     E  +Y
Sbjct:   16 KEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF1_SCHPO (ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe GN=arf1 PE=2 SV=2)

HSP 1 Score: 49.2914 bits (116), Expect = 5.938e-11
Identity = 23/86 (26.74%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I F  +D+GG    R +W+ Y+     ++++VD+ D+ER +E+  EL  +L+++ L +     F  ++ + + ++   E+   LGL
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLPNAMNAA-EITDKLGL 145          

HSP 2 Score: 36.965 bits (84), Expect = 5.938e-11
Identity = 20/44 (45.45%), Postives = 27/44 (61.36%), Query Frame = 1
Query:  163 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            ++E +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:   15 KREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF_ASHGO (ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1 PE=3 SV=3)

HSP 1 Score: 48.521 bits (114), Expect = 5.938e-11
Identity = 17/58 (29.31%), Postives = 36/58 (62.07%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLAN 475
            I F  +D+GG    R +W+ Y+   + ++++VD+ D+ R AE++  L  +L+++ + N
Sbjct:   61 ISFTVWDVGGQDKIRPLWRHYFRNTEGIIFVVDSNDRSRIAEAREVLQRMLNEDEIRN 118          

HSP 2 Score: 37.7354 bits (86), Expect = 5.938e-11
Identity = 21/43 (48.84%), Postives = 26/43 (60.47%), Query Frame = 1
Query:  166 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:   16 KEMRILMVGLDGAGKTTVLYKLKLGEVVTTIPTIGFNVETVEY 58          
The following BLAST results are available for this feature:
BLAST of GO241618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
ARF6_RAT4.581e-1126.44ADP-ribosylation factor 6 OS=Rattus norvegicus GN=... [more]
ARF6_PIG4.581e-1126.44ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE... [more]
ARF6_MOUSE4.581e-1126.44ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 ... [more]
ARF6_HUMAN4.581e-1126.44ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 ... [more]
ARF6_CHICK4.581e-1126.44ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6... [more]
ARF3_DROME4.581e-1126.44ADP-ribosylation factor 3 OS=Drosophila melanogast... [more]
ARL6_MOUSE5.928e-1130.88ADP-ribosylation factor-like protein 6 OS=Mus musc... [more]
ARF1_YEAST5.938e-1127.94ADP-ribosylation factor 1 OS=Saccharomyces cerevis... [more]
ARF1_SCHPO5.938e-1126.74ADP-ribosylation factor 1 OS=Schizosaccharomyces p... [more]
ARF_ASHGO5.938e-1129.31ADP-ribosylation factor OS=Ashbya gossypii GN=ARF1... [more]

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Properties
Property NameValue
Genbank description266 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 388 5, mRNA sequence.