GO241618

Overview
NameGO241618
Unique NameGO241618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.522e-39
Identity = 50/98 (51.02%), Postives = 63/98 (64.29%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTN 565
            P   +L+IG IKF  FDLGGH  ARR+WKDY+  ++ +V+LVDA D ERF E++ ELDAL   + L NVPF   G  K+ S     + ELR  LGL N
Sbjct:   57 PTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLG-NKIDSPSAVSETELRAALGLMN 153          

HSP 2 Score: 89.7373 bits (221), Expect = 1.522e-39
Identity = 42/56 (75.00%), Postives = 46/56 (82.14%), Query Frame = 1
Query:  118 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            LF WF  IL+SLGLW K  K+LFLGLDNAGKTTLLHMLK++RL   QPT HPTSEE
Sbjct:    6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEE 61          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_YARLI (Small COPII coat GTPase SAR1 OS=Yarrowia lipolytica GN=SAR1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.384e-39
Identity = 40/58 (68.97%), Postives = 49/58 (84.48%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            M++ +WFY +L+SLGLW K AK+LFLGLDNAGKTTLLHMLK++R+    PT HPTSEE
Sbjct:    1 MWIVNWFYDVLSSLGLWNKNAKLLFLGLDNAGKTTLLHMLKNDRMAVSNPTVHPTSEE 58          

HSP 2 Score: 89.3521 bits (220), Expect = 4.384e-39
Identity = 44/77 (57.14%), Postives = 53/77 (68.83%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +LSIG  KF  FDLGGH  ARRVWKDY+  ++ +V+LVDA D  RFAESK ELD+LL+ E L  VPF   G +
Sbjct:   54 PTSEELSIGNCKFTTFDLGGHIQARRVWKDYFPEVNGIVFLVDAADPTRFAESKAELDSLLAIEQLKTVPFLILGNK 130          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.794e-38
Identity = 42/56 (75.00%), Postives = 46/56 (82.14%), Query Frame = 1
Query:  118 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            LF WF  IL+SLGLW K  K+LFLGLDNAGKTTLLHMLK++RL   QPT HPTSEE
Sbjct:    6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEE 61          

HSP 2 Score: 88.5817 bits (218), Expect = 2.794e-38
Identity = 48/98 (48.98%), Postives = 61/98 (62.24%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTN 565
            P   +L+IG IKF  FDLGGH  ARR+WKDY+  ++ +V+LVDA D ERF E++ ELDAL     L  VPF   G  K+ +     + ELR  LGL N
Sbjct:   57 PTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILG-NKIDAPSAVSETELRAALGLLN 153          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_YEAST (Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae GN=SAR1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.640e-38
Identity = 41/56 (73.21%), Postives = 46/56 (82.14%), Query Frame = 1
Query:  118 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            +F WF  +LASLGLW K  K+LFLGLDNAGKTTLLHMLK++RL   QPT HPTSEE
Sbjct:    6 IFGWFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEE 61          

HSP 2 Score: 88.1965 bits (217), Expect = 3.640e-38
Identity = 48/98 (48.98%), Postives = 63/98 (64.29%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTN 565
            P   +L+IG IKF  FDLGGH  ARR+WKDY+  ++ +V+LVDA D ERF E++ ELDAL +   L +VPF   G  K+ +     + ELR  LGL N
Sbjct:   57 PTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILG-NKIDAPNAVSEAELRSALGLLN 153          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.365e-37
Identity = 40/57 (70.18%), Postives = 48/57 (84.21%), Query Frame = 1
Query:  115 FLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            FL+DWF G+L  LGL  K+ K++FLGLDNAGKTTLLHMLKD+R+ QH PT HPTSE+
Sbjct:    3 FLWDWFNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQ 59          

HSP 2 Score: 86.2705 bits (212), Expect = 1.365e-37
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            P   ++S+G I F  +DLGGH  ARRVWKDY+  +DAVV+L+D  D ER  ES+ EL++LL DE +A+VP    G  K+       +D+L++ L +
Sbjct:   55 PTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILG-NKIDKPGALSEDQLKWQLNI 149          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.779e-37
Identity = 41/56 (73.21%), Postives = 46/56 (82.14%), Query Frame = 1
Query:  118 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            +F WF  +LASLGLW K  K+LFLGLDNAGKTTLLHMLK++RL   QPT HPTSEE
Sbjct:    5 VFGWFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEE 60          

HSP 2 Score: 86.2705 bits (212), Expect = 1.779e-37
Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTN 565
            P   +L+IG IKF  FDLGGH  ARR+WKDY+  ++ +V+LVD+ D +RF E++ ELDAL +   L +VPF   G  K+ +     + ELR  LGL N
Sbjct:   56 PTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKDVPFVILG-NKIDAANAVSEAELRSALGLLN 152          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.078e-35
Identity = 49/96 (51.04%), Postives = 61/96 (63.54%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            P   +LSIG +KF  FDLGGH  ARR+W+DY+  +  +V+LVDA D ER  ESK ELDALL+ E L N PF   G  K+       +D+LR  LGL
Sbjct:   50 PTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAELDALLAMEELKNTPFVILG-NKIDHPEAVSEDQLRATLGL 144          

HSP 2 Score: 76.2554 bits (186), Expect = 2.078e-35
Identity = 36/51 (70.59%), Postives = 43/51 (84.31%), Query Frame = 1
Query:  133 YGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            + +L+SLGL  K AK+LFLGLDNAGKTTLLHMLK++R+   QPT HPTSEE
Sbjct:    4 WDVLSSLGLMNKHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTLHPTSEE 54          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.703e-35
Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  115 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEE
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 63          

HSP 2 Score: 81.6481 bits (200), Expect = 2.703e-35
Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +L+I  + F  FDLGGH  ARRVWK+Y   ++ +V+LVD  D ER  ESK ELD+L++DE++ANVP    G +
Sbjct:   59 PTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNK 135          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.521e-35
Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  115 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEE
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 63          

HSP 2 Score: 81.6481 bits (200), Expect = 3.521e-35
Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +L+I  + F  FDLGGH  ARRVWK+Y   ++ +V+LVD  D ER  ESK ELD+L++DE++ANVP    G +
Sbjct:   59 PTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNK 135          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.521e-35
Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  115 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEE
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 63          

HSP 2 Score: 81.6481 bits (200), Expect = 3.521e-35
Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +L+I  + F  FDLGGH  ARRVWK+Y   ++ +V+LVD  D ER  ESK ELD+L++DE++ANVP    G +
Sbjct:   59 PTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNK 135          
The following BLAST results are available for this feature:
BLAST of GO241618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
SAR1_KLULA1.522e-3951.02Small COPII coat GTPase SAR1 OS=Kluyveromyces lact... [more]
SAR1_YARLI4.384e-3968.97Small COPII coat GTPase SAR1 OS=Yarrowia lipolytic... [more]
SAR1_ASHGO2.794e-3875.00Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN... [more]
SAR1_YEAST3.640e-3873.21Small COPII coat GTPase SAR1 OS=Saccharomyces cere... [more]
SAR1_CAEEL1.365e-3770.18GTP-binding protein SAR1 OS=Caenorhabditis elegans... [more]
SAR1_CANGA1.779e-3773.21Small COPII coat GTPase SAR1 OS=Candida glabrata G... [more]
SAR1_PHANO2.078e-3551.04Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodo... [more]
SAR1B_MOUSE2.703e-3567.21GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b... [more]
SAR1B_RAT3.521e-3567.21GTP-binding protein SAR1b OS=Rattus norvegicus GN=... [more]
SAR1B_HUMAN3.521e-3567.21GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B... [more]

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Properties
Property NameValue
Genbank description266 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 388 5, mRNA sequence.