GO241618

Overview
NameGO241618
Unique NameGO241618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.586e-35
Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  115 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEE
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 63          

HSP 2 Score: 81.2629 bits (199), Expect = 4.586e-35
Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +L+I  + F  FDLGGH  ARRVWK+Y   ++ +V+LVD  D ER  ESK ELD+L++DE++ANVP    G +
Sbjct:   59 PTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNK 135          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.586e-35
Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  115 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEE
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 63          

HSP 2 Score: 81.2629 bits (199), Expect = 4.586e-35
Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +L+I  + F  FDLGGH  ARRVWK+Y   ++ +V+LVD  D ER  ESK ELD+L++DE++ANVP    G +
Sbjct:   59 PTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNK 135          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.586e-35
Identity = 41/61 (67.21%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  115 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            F+FDW Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEE
Sbjct:    3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 63          

HSP 2 Score: 81.2629 bits (199), Expect = 4.586e-35
Identity = 38/77 (49.35%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +L+I  + F  FDLGGH  ARRVWK+Y   ++ +V+LVD  D ER  ESK ELD+L++DE++ANVP    G +
Sbjct:   59 PTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNK 135          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.446e-34
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  115 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            F+F+W Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEE
Sbjct:    3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 63          

HSP 2 Score: 78.5666 bits (192), Expect = 6.446e-34
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +L+I  + F  FDLGGH+ ARRVWK+Y   ++ +V+LVD  D  R  ESK EL+AL++DE+++NVP    G +
Sbjct:   59 PTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNK 135          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.446e-34
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  115 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            F+F+W Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEE
Sbjct:    3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 63          

HSP 2 Score: 78.5666 bits (192), Expect = 6.446e-34
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +L+I  + F  FDLGGH+ ARRVWK+Y   ++ +V+LVD  D  R  ESK EL+AL++DE+++NVP    G +
Sbjct:   59 PTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNK 135          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.094e-33
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  115 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            F+F+W Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEE
Sbjct:    3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 63          

HSP 2 Score: 77.7962 bits (190), Expect = 1.094e-33
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +L+I  + F  FDLGGH+ ARRVWK+Y   ++ +V+LVD  D  R  ESK EL+AL++DE+++NVP    G +
Sbjct:   59 PTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNK 135          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.094e-33
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  115 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            F+F+W Y     +L  LGL++K  K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEE
Sbjct:    3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEE 63          

HSP 2 Score: 77.7962 bits (190), Expect = 1.094e-33
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +L+I  + F  FDLGGH+ ARRVWK+Y   ++ +V+LVD  D  R  ESK EL+AL++DE+++NVP    G +
Sbjct:   59 PTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNK 135          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 6.952e-33
Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 1
Query:  115 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            F+F+W Y     +L  LGL++K  K++FLGLDNAGKTTLL MLKD+RL QH PT HPTSEE
Sbjct:    3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLQMLKDDRLGQHVPTLHPTSEE 63          

HSP 2 Score: 78.1814 bits (191), Expect = 6.952e-33
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQ 502
            P   +L+I  + F  FDLGGH+ ARRVWK+Y   ++ +V+LVD  D  R  ESK EL+AL++DE+++NVP    G +
Sbjct:   59 PTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNK 135          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-27
Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVP 481
            P  ++L +G I+FK FDLGGH++AR++W+ Y    D +V+LVD+ D  RF ES+R L  LL +  LA  P
Sbjct:   54 PTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTP 123          

HSP 2 Score: 65.4698 bits (158), Expect = 1.703e-27
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1
Query:  124 DWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            DWF   L+ LGL++K+A I+F+GLDNAGK+TLL MLK+       PTQ PTS+E
Sbjct:    5 DWFKSALSFLGLYKKKATIVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQE 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.092e-22
Identity = 33/61 (54.10%), Postives = 40/61 (65.57%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            MFL DWFY +   LG ++KEAKI+ +GL NAGKTTLLH+L    L  H PT  P +E   Y
Sbjct:    1 MFLVDWFYNMFLWLGFFKKEAKIVIIGLGNAGKTTLLHLLVTGSLKSHIPTLRPNAESFTY 61          

HSP 2 Score: 56.225 bits (134), Expect = 1.092e-22
Identity = 36/106 (33.96%), Postives = 51/106 (48.11%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYA-RLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDEL-------RYHLGLTN 565
            P     + G + FKA+DLGG Q  R +WK Y       +V++VD+ D     ESK E+  +L DE L+  P    G  K  +   H ++ L       R+ LGL N
Sbjct:   54 PNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILG-SKCDAKGHHNRENLIDLLDIRRFELGLNN 158          
The following BLAST results are available for this feature:
BLAST of GO241618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
SAR1B_PIG4.586e-3567.21GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B P... [more]
SAR1B_CRIGR4.586e-3567.21GTP-binding protein SAR1b OS=Cricetulus griseus GN... [more]
SAR1B_BOVIN4.586e-3567.21GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B P... [more]
SAR1A_PONAB6.446e-3465.57GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A... [more]
SAR1A_HUMAN6.446e-3465.57GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A... [more]
SAR1A_PIG1.094e-3365.57GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A P... [more]
SAR1A_BOVIN1.094e-3365.57GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A P... [more]
SAR1A_MOUSE6.952e-3363.93GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a... [more]
SAR1_GIALA1.703e-2747.14GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR... [more]
SAR1B_DICDI1.092e-2254.10GTP-binding protein Sar1B OS=Dictyostelium discoid... [more]

Pages

back to top
Properties
Property NameValue
Genbank description266 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 388 5, mRNA sequence.