GO241618

Overview
NameGO241618
Unique NameGO241618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.455e-13
Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            +KF+ +DLGG    R  W+ YY+  DAV+Y+VD+ D++R   SK EL A+L +E L       F  ++ +   +    E+   LGL
Sbjct:   61 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAM-TSSEMANSLGL 145          

HSP 2 Score: 36.1946 bits (82), Expect = 1.455e-13
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 1
Query:  127 WFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            +F  I +SL    +E +IL LGLD AGKTT+L+ L+   +V   PT
Sbjct:    4 FFSSIFSSL-FGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPT 48          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.890e-13
Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESL 469
            +KF+ +DLGG    R  W+ YY+  DAV+Y+VD+ D++R   SK EL A+L +E L
Sbjct:   61 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEEL 116          

HSP 2 Score: 36.1946 bits (82), Expect = 1.890e-13
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 1
Query:  127 WFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            +F  I +SL    +E +IL LGLD AGKTT+L+ L+   +V   PT
Sbjct:    4 FFSSIFSSL-FGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPT 48          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.890e-13
Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESL 469
            +KF+ +DLGG    R  W+ YY+  DAV+Y+VD+ D++R   SK EL A+L +E L
Sbjct:   61 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEEL 116          

HSP 2 Score: 36.1946 bits (82), Expect = 1.890e-13
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 1
Query:  127 WFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            +F  I +SL    +E +IL LGLD AGKTT+L+ L+   +V   PT
Sbjct:    4 FFSSIFSSL-FGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPT 48          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.890e-13
Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESL 469
            +KF+ +DLGG    R  W+ YY+  DAV+Y+VD+ D++R   SK EL A+L +E L
Sbjct:   61 LKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEEL 116          

HSP 2 Score: 36.1946 bits (82), Expect = 1.890e-13
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 1
Query:  127 WFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            +F  I +SL    +E +IL LGLD AGKTT+L+ L+   +V   PT
Sbjct:    4 FFSSIFSSL-FGTREMRILILGLDGAGKTTILYRLQVGEVVTTIPT 48          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL1_DROME (ADP-ribosylation factor-like protein 1 OS=Drosophila melanogaster GN=Arf72A PE=1 SV=5)

HSP 1 Score: 56.225 bits (134), Expect = 1.890e-13
Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLA 472
            +KF+ +DLGG    R  W+ YY+  DA++Y+VD+ D++R   SK EL  +L +E LA
Sbjct:   60 LKFQVWDLGGQTSIRPYWRCYYSNTDAIIYVVDSADRDRIGISKDELLYMLREEELA 116          

HSP 2 Score: 38.5058 bits (88), Expect = 1.890e-13
Identity = 23/59 (38.98%), Postives = 33/59 (55.93%), Query Frame = 1
Query:  118 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            +  +F G+L S     +E +IL LGLD AGKTT+L+ L+   +V   PT     E+  Y
Sbjct:    4 VLSYFRGLLGS-----REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVTY 57          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL11_RAT (ADP-ribosylation factor-like protein 11 OS=Rattus norvegicus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.893e-13
Identity = 24/63 (38.10%), Postives = 38/63 (60.32%), Query Frame = 2
Query:  296 GKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPF 484
            G +    +D+GG    R  WKDY   +D +VY++D+ D+ R  E+  EL+ +L D ++A VPF
Sbjct:   53 GHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPF 115          

HSP 2 Score: 38.5058 bits (88), Expect = 1.893e-13
Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  169 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            +A+++ LGLD AGKTT+L+ LK  RLV   PT
Sbjct:   10 KAQVVMLGLDCAGKTTILYKLKGNRLVDTLPT 41          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL1_CAEEL (ADP-ribosylation factor-like protein 1 OS=Caenorhabditis elegans GN=arl-1 PE=2 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 2.455e-13
Identity = 23/56 (41.07%), Postives = 38/56 (67.86%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESL 469
            +KF+ +DLGG    R  W+ YYA  DA++Y+VD+ D++R   S++EL  +L ++ L
Sbjct:   60 LKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQEDEL 115          

HSP 2 Score: 38.1206 bits (87), Expect = 2.455e-13
Identity = 20/43 (46.51%), Postives = 27/43 (62.79%), Query Frame = 1
Query:  166 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            +E +IL LGLD AGKTT+L+ L+   +V   PT     E+ EY
Sbjct:   15 REMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEY 57          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL11_BOVIN (ADP-ribosylation factor-like protein 11 OS=Bos taurus GN=ARL11 PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.187e-13
Identity = 30/91 (32.97%), Postives = 47/91 (51.65%), Query Frame = 2
Query:  296 GKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTNF 568
            G +    +D+GG    R  WKD+    D +VY++D+ D+ R  E+  EL  +L D S+A+VP      ++ +   L    E+R  LGL  F
Sbjct:   55 GHVSLTLWDVGGQSQLRASWKDHLEGTDILVYVLDSTDEARLPEAVAELREVLDDPSVASVPLLVLANKQEVPQALSL-PEIRDRLGLQGF 144          

HSP 2 Score: 40.0466 bits (92), Expect = 3.187e-13
Identity = 18/32 (56.25%), Postives = 26/32 (81.25%), Query Frame = 1
Query:  169 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            EA+++ +GLD+AGKTTLL+ LK  +LV+  PT
Sbjct:   12 EAQVVMMGLDSAGKTTLLYRLKGYQLVETLPT 43          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3)

HSP 1 Score: 52.373 bits (124), Expect = 4.140e-13
Identity = 23/56 (41.07%), Postives = 34/56 (60.71%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESL 469
            IKF+ +DLGG    R  W+ Y+    AV+Y+VD+ D +R   +K E  A+L +E L
Sbjct:   61 IKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEEL 116          

HSP 2 Score: 41.2022 bits (95), Expect = 4.140e-13
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 1
Query:  166 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            KEA+IL LGLDNAGKTT+L+ L+   +V   PT     E  +Y
Sbjct:   16 KEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 6.976e-13
Identity = 23/78 (29.49%), Postives = 44/78 (56.41%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKD 535
            +    +D+GG    R +WK YY   +A++++VD+ D+ER  E K E+D LL  E L  +    F  ++ +++ ++  +
Sbjct:   69 LSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSE 146          

HSP 2 Score: 39.6614 bits (91), Expect = 6.976e-13
Identity = 23/55 (41.82%), Postives = 32/55 (58.18%), Query Frame = 1
Query:  130 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            F+  + SL   +K+ +IL +GLD AGK+TLL+ LK   +V   PT     E  EY
Sbjct:   12 FFSNIFSLFEGKKQTRILMIGLDGAGKSTLLYKLKLGDIVSTVPTIGFNVETIEY 66          
The following BLAST results are available for this feature:
BLAST of GO241618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
ARL1_HUMAN1.455e-1336.05ADP-ribosylation factor-like protein 1 OS=Homo sap... [more]
ARL1_RAT1.890e-1346.43ADP-ribosylation factor-like protein 1 OS=Rattus n... [more]
ARL1_MOUSE1.890e-1346.43ADP-ribosylation factor-like protein 1 OS=Mus musc... [more]
ARL1_BOVIN1.890e-1346.43ADP-ribosylation factor-like protein 1 OS=Bos taur... [more]
ARL1_DROME1.890e-1343.86ADP-ribosylation factor-like protein 1 OS=Drosophi... [more]
ARL11_RAT1.893e-1338.10ADP-ribosylation factor-like protein 11 OS=Rattus ... [more]
ARL1_CAEEL2.455e-1341.07ADP-ribosylation factor-like protein 1 OS=Caenorha... [more]
ARL11_BOVIN3.187e-1332.97ADP-ribosylation factor-like protein 11 OS=Bos tau... [more]
ARF1_BRARP4.140e-1341.07ADP-ribosylation factor 1 OS=Brassica rapa subsp. ... [more]
ARFH_DICDI6.976e-1329.49ADP-ribosylation factor H OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank description266 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 388 5, mRNA sequence.