GO241618

Overview
NameGO241618
Unique NameGO241618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARFRP_MOUSE (ADP-ribosylation factor-related protein 1 OS=Mus musculus GN=Arfrp1 PE=2 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 9.498e-12
Identity = 24/65 (36.92%), Postives = 41/65 (63.08%), Query Frame = 2
Query:  287 LSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVP 481
            + +GK +   +DLGG +  + +W  YYA    V+Y++D+ D+ER +ESK   + ++S E+L  VP
Sbjct:   64 VDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVSSEALDGVP 128          

HSP 2 Score: 30.4166 bits (67), Expect = 9.498e-12
Identity = 17/27 (62.96%), Postives = 19/27 (70.37%), Query Frame = 1
Query:  157 LWQK-EAKILFLGLDNAGKTTLLHMLK 234
            ++QK E  IL LGLDNAGKTT L   K
Sbjct:   12 MFQKDEYCILILGLDNAGKTTFLEQSK 38          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3)

HSP 1 Score: 49.6766 bits (117), Expect = 9.531e-12
Identity = 22/88 (25.00%), Postives = 51/88 (57.95%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTN 565
            I+F  +D+GG    R +W+ Y+     ++++VD+ D++R  E++ EL  +L+++ L +     F  ++ + + ++   E+   LGL++
Sbjct:   64 IQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAA-EITDKLGLSS 150          

HSP 2 Score: 39.2762 bits (90), Expect = 9.531e-12
Identity = 25/59 (42.37%), Postives = 32/59 (54.24%), Query Frame = 1
Query:  118 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            LFD  +G        +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:   11 LFDGLFG--------KKEMRILMVGLDAAGKTTILYKLKLGEVVTTIPTIGFNVETVEY 61          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL2_CAEEL (ADP-ribosylation factor-like protein 2 OS=Caenorhabditis elegans GN=evl-20 PE=2 SV=2)

HSP 1 Score: 50.447 bits (119), Expect = 9.538e-12
Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 2
Query:  293 IGKIKFKAF-----DLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLA 472
            I  + FK F     D+GG +  R  WK+Y+   DA++++VD+ D+ER  +   EL  LL +E LA
Sbjct:   52 IKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLA 116          

HSP 2 Score: 38.5058 bits (88), Expect = 9.538e-12
Identity = 21/45 (46.67%), Postives = 26/45 (57.78%), Query Frame = 1
Query:  130 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            F  IL      ++E +IL LGLDNAGKTTL+    DE     +PT
Sbjct:    3 FLKILRKQRAREREMRILILGLDNAGKTTLMKKFLDEPTDTIEPT 47          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL8A_MOUSE (ADP-ribosylation factor-like protein 8A OS=Mus musculus GN=Arl8a PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.238e-11
Identity = 29/85 (34.12%), Postives = 47/85 (55.29%), Query Frame = 2
Query:  281 RKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKD 535
            RK++ G +  K +D+GG    R +W+ Y   + A+VY+VDA D+E+   SK EL  LL    L  +P    G ++ ++  L  K+
Sbjct:   58 RKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLAGALDEKE 142          

HSP 2 Score: 30.0314 bits (66), Expect = 1.238e-11
Identity = 12/38 (31.58%), Postives = 23/38 (60.53%), Query Frame = 1
Query:  118 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHML 231
            L DWF  +      W++E ++  +GL  +GKTT ++++
Sbjct:    8 LLDWFKALF-----WKEEMELTLVGLQYSGKTTFVNVI 40          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF3_YEAST (ADP-ribosylation factor 3 OS=Saccharomyces cerevisiae GN=ARF3 PE=1 SV=2)

HSP 1 Score: 49.2914 bits (116), Expect = 1.239e-11
Identity = 18/59 (30.51%), Postives = 38/59 (64.41%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANV 478
            +KF  +D+GG Q  R +W+ Y+    A+++++D+  + R  E+K EL +++ ++ + NV
Sbjct:   61 VKFNMWDVGGQQRLRPLWRHYFPATTALIFVIDSSARNRMEEAKEELYSIIGEKEMENV 119          

HSP 2 Score: 39.2762 bits (90), Expect = 1.239e-11
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 1
Query:  166 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            KE KIL LGLD AGKTT+L+ LK  ++    PT
Sbjct:   16 KEMKILMLGLDKAGKTTILYKLKLNKIKTSTPT 48          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARFRP_BOVIN (ADP-ribosylation factor-related protein 1 OS=Bos taurus GN=ARFRP1 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.601e-11
Identity = 23/65 (35.38%), Postives = 42/65 (64.62%), Query Frame = 2
Query:  287 LSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVP 481
            + +GK +   +DLGG +  + +W  YYA    V+Y++D+ D+ER +ESK+  + +++ E+L  VP
Sbjct:   64 VDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKQAFEKMVTSEALDGVP 128          

HSP 2 Score: 30.0314 bits (66), Expect = 1.601e-11
Identity = 16/27 (59.26%), Postives = 19/27 (70.37%), Query Frame = 1
Query:  157 LWQK-EAKILFLGLDNAGKTTLLHMLK 234
            ++QK E  +L LGLDNAGKTT L   K
Sbjct:   12 MFQKDEYCVLILGLDNAGKTTFLEQSK 38          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARL2_CAEBR (ADP-ribosylation factor-like protein 2 OS=Caenorhabditis briggsae GN=evl-20.1 PE=3 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 1.608e-11
Identity = 24/65 (36.92%), Postives = 38/65 (58.46%), Query Frame = 2
Query:  293 IGKIKFKAF-----DLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLA 472
            I  + FK F     D+GG +  R  WK+Y+   DA++++VD+ D+ER  +   EL  LL +E L+
Sbjct:   52 IKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLTQCSEELKKLLQEERLS 116          

HSP 2 Score: 38.5058 bits (88), Expect = 1.608e-11
Identity = 21/45 (46.67%), Postives = 26/45 (57.78%), Query Frame = 1
Query:  130 FYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPT 264
            F  IL      ++E +IL LGLDNAGKTTL+    DE     +PT
Sbjct:    3 FLKILRKQRAREREMRILILGLDNAGKTTLMKKFLDEPTDTIEPT 47          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARF_AJECA (ADP-ribosylation factor OS=Ajellomyces capsulata GN=ARF PE=1 SV=3)

HSP 1 Score: 49.2914 bits (116), Expect = 1.608e-11
Identity = 22/86 (25.58%), Postives = 48/86 (55.81%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            I+F  +D+GG    R +W+ Y+     ++++VD+ D++R  E++ EL  +L+++ L +     F  ++ + + +    E+   LGL
Sbjct:   61 IQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMSPA-EITQQLGL 145          

HSP 2 Score: 38.891 bits (89), Expect = 1.608e-11
Identity = 25/59 (42.37%), Postives = 32/59 (54.24%), Query Frame = 1
Query:  118 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            LFD  +G        +KE +IL +GLD AGKTT+L+ LK   +V   PT     E  EY
Sbjct:    8 LFDRIWG--------KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARD1_MOUSE (GTP-binding protein ARD-1 OS=Mus musculus GN=Trim23 PE=2 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 2.009e-11
Identity = 24/78 (30.77%), Postives = 45/78 (57.69%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKD 535
            +KF  +D+GG    R +WK YY    AVV++VD+  ++R +E+  EL  LL+++ L +     F  ++ ++  L  ++
Sbjct:  448 LKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEE 525          

HSP 2 Score: 37.7354 bits (86), Expect = 2.009e-11
Identity = 19/42 (45.24%), Postives = 25/42 (59.52%), Query Frame = 1
Query:  169 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            E +++ LGLD AGKTT+L  LK +  +Q  PT     E  EY
Sbjct:  404 EIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEY 445          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: ARD1_HUMAN (GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM23 PE=1 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 2.009e-11
Identity = 24/78 (30.77%), Postives = 45/78 (57.69%), Query Frame = 2
Query:  302 IKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKD 535
            +KF  +D+GG    R +WK YY    AVV++VD+  ++R +E+  EL  LL+++ L +     F  ++ ++  L  ++
Sbjct:  448 LKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEE 525          

HSP 2 Score: 37.7354 bits (86), Expect = 2.009e-11
Identity = 19/42 (45.24%), Postives = 25/42 (59.52%), Query Frame = 1
Query:  169 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEETEY 294
            E +++ LGLD AGKTT+L  LK +  +Q  PT     E  EY
Sbjct:  404 EIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEY 445          
The following BLAST results are available for this feature:
BLAST of GO241618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
ARFRP_MOUSE9.498e-1236.92ADP-ribosylation factor-related protein 1 OS=Mus m... [more]
ARF_NEUCR9.531e-1225.00ADP-ribosylation factor OS=Neurospora crassa GN=NC... [more]
ARL2_CAEEL9.538e-1238.46ADP-ribosylation factor-like protein 2 OS=Caenorha... [more]
ARL8A_MOUSE1.238e-1134.12ADP-ribosylation factor-like protein 8A OS=Mus mus... [more]
ARF3_YEAST1.239e-1130.51ADP-ribosylation factor 3 OS=Saccharomyces cerevis... [more]
ARFRP_BOVIN1.601e-1135.38ADP-ribosylation factor-related protein 1 OS=Bos t... [more]
ARL2_CAEBR1.608e-1136.92ADP-ribosylation factor-like protein 2 OS=Caenorha... [more]
ARF_AJECA1.608e-1125.58ADP-ribosylation factor OS=Ajellomyces capsulata G... [more]
ARD1_MOUSE2.009e-1130.77GTP-binding protein ARD-1 OS=Mus musculus GN=Trim2... [more]
ARD1_HUMAN2.009e-1130.77GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM2... [more]

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Properties
Property NameValue
Genbank description266 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 388 5, mRNA sequence.