GO241615

Overview
NameGO241615
Unique NameGO241615
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM_CAEEL (Probable phosphomannomutase OS=Caenorhabditis elegans GN=F52B11.2 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.247e-36
Identity = 79/174 (45.40%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  145 MLEFMRELRKVVTVGVVGGSDLSKISEQLGK------------------------TVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 594
            M EF+ E RK V + +VGGSD  KI+EQL                           V+  +DY FSENGL   K  +    QS++  +G  KL+E INF L Y++D+ +P+KRG F+EFR+GM+N+SPIGR+CSQEER +F  +DK H IR K    LREKF    L F+IGGQ
Sbjct:    1 MREFLIEARKRVPLAIVGGSDFKKITEQLADHDKDLCMSLLIFFFELQILISSFFPVLSLFDYTFSENGLYGFKGTEPYPVQSIQKAIGDAKLQELINFALRYMSDIQLPVKRGNFVEFRNGMINLSPIGRSCSQEERMQFVEFDKKHGIRQKFTEQLREKFGQYGLQFAIGGQ 174          
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM_BABBO (Phosphomannomutase OS=Babesia bovis GN=PMM PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.395e-33
Identity = 75/173 (43.35%), Postives = 102/173 (58.96%), Query Frame = 1
Query:   85 LALFDVDGTLTAPRKAATPQMLEFMREL-RKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKF--AHLNLTFSIGGQ 594
            + +FD+DGTLT P +     + + +R   RK   + VV GS   KI  QL    IDE+DYVFSENG   +    L+ +  +   +   KL++ + F L YIADLDIP KRGTFIE R  ++NI P GRNCS  +R  F  YD IH++R K++ VL+ +F      L+F  GGQ
Sbjct:    5 MLIFDMDGTLTDPVQVINNDVKDILRRCKRKNFEIAVVSGSKYEKIKGQLNDGFIDEFDYVFSENGTQVYVKNVLVKSLDITEAIPETKLRKMVEFCLRYIADLDIPTKRGTFIEHRKSLINICPPGRNCSMVDRRRFVEYDSIHHVRQKLIQVLKSQFDSDDCPLSFVAGGQ 177          
The following BLAST results are available for this feature:
BLAST of GO241615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PMM_CAEEL4.247e-3645.40Probable phosphomannomutase OS=Caenorhabditis eleg... [more]
PMM_BABBO4.395e-3343.35Phosphomannomutase OS=Babesia bovis GN=PMM PE=2 SV... [more]

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Properties
Property NameValue
Genbank description263 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 385 5, mRNA sequence.