GO241611

Overview
NameGO241611
Unique NameGO241611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: PIN1_SCHPO (Peptidyl-prolyl cis-trans isomerase pin1 OS=Schizosaccharomyces pombe GN=pin1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.254e-19
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 3
Query:  150 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDT 458
            ++RASH+L+KH+ SRR +SWK+          R+ A    Q ++    SG     ++A + SDCSSA+RGG+LG FGR +MQKPFE+A + LK GEIS VV+T
Sbjct:   66 KIRASHLLVKHRESRRPSSWKEEHITRSKEEARKLAEHYEQLLK----SGSVSMHDLAMKESDCSSARRGGELGEFGRDEMQKPFEDAAFALKPGEISGVVET 164          
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: ESS1_YEAST (Peptidyl-prolyl cis-trans isomerase ESS1 OS=Saccharomyces cerevisiae GN=ESS1 PE=1 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.237e-17
Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 3
Query:  150 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDTG 461
            +VR  HILIKH+ SRR AS +     +      +   + +  + DD  S    F+ +A   SDCSS KRGGDLG FGRG+MQ  FE+A + LK+GE+S++V++G
Sbjct:   59 RVRCLHILIKHKDSRRPASHRSENITISKQDATDELKTLITRLDDD--SKTNSFEALAKERSDCSSYKRGGDLGWFGRGEMQPSFEDAAFQLKVGEVSDIVESG 160          
The following BLAST results are available for this feature:
BLAST of GO241611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PIN1_SCHPO2.254e-1947.57Peptidyl-prolyl cis-trans isomerase pin1 OS=Schizo... [more]
ESS1_YEAST1.237e-1744.23Peptidyl-prolyl cis-trans isomerase ESS1 OS=Saccha... [more]

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Properties
Property NameValue
Genbank description259 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 381 5, mRNA sequence.