GO241608

Overview
NameGO241608
Unique NameGO241608
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD2_DROME (Probable V-type proton ATPase subunit D 2 OS=Drosophila melanogaster GN=CG8310 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.924e-14
Identity = 44/105 (41.90%), Postives = 62/105 (59.05%), Query Frame = 1
Query:  157 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTLFLRMCKMLLLKFDPVKXNIAXV 471
            MA   RL + P+     +MKSRL GAT+GH LLKKK+DAL ++FR IL  I+ TK  MG+VMK+++F+L E        +  +   + K   +K    K N+A V
Sbjct:    1 MAAKDRLPIFPSRGAQTLMKSRLAGATKGHGLLKKKADALQMRFRLILGKIIETKTLMGQVMKEAAFSLAEVKFTTGDINQIVLQNVTK-AQIKIRTKKDNVAGV 104          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_MANSE (V-type proton ATPase subunit D OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.694e-14
Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  157 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTLFLRMCKMLLLKFDPVKXNIAXV 471
            M+   RL + P+     +MK RL GA +GH LLKKK+DAL V+FR IL  I+ TK  MGEVMK+++F+L EA       +  +   + K   +K    K N+A V
Sbjct:    1 MSGKDRLAIFPSRGAQMLMKGRLAGAQKGHGLLKKKADALQVRFRLILSKIIETKTLMGEVMKEAAFSLAEAKFTTGDFNQVVLQNVTK-AQIKIRSKKDNVAGV 104          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_CAEBR (V-type proton ATPase subunit D OS=Caenorhabditis briggsae GN=vha-14 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.322e-13
Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 1
Query:  172 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTL 405
            R+ V P+     +MK+RL GA +GH+LLKKK+DAL ++FR ILK IV  K  MGEVMK+++F+L EA       S T+
Sbjct:    9 RIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILKKIVENKVLMGEVMKEAAFSLAEAKFTAGDFSHTV 86          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD1_DROME (V-type proton ATPase subunit D 1 OS=Drosophila melanogaster GN=Vha36 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.666e-13
Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = 1
Query:  157 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTLFLRMCKMLLLKFDPVKXNIAXV 471
            M+   RL + P+     +MK+RL GA +GH LLKKK+DAL ++FR IL  I+ TK  MG+VMK+++F+L EA       +  +   + K   +K    K N+A V
Sbjct:    1 MSGKDRLPIFPSRGAQMLMKARLAGAQKGHGLLKKKADALQMRFRLILGKIIETKTLMGDVMKEAAFSLAEAKFTSGDINQVVLQNVTK-AQIKIRTKKDNVAGV 104          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_CAEEL (V-type proton ATPase subunit D OS=Caenorhabditis elegans GN=vha-14 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.401e-13
Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 1
Query:  172 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTL 405
            R+ V P+     +MK+RL GA +GH+LLKKK+DAL ++FR IL+ IV  K  MGEVMK+++F+L EA       S T+
Sbjct:    8 RIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILRKIVENKVLMGEVMKEAAFSLAEAKFTAGDFSHTV 85          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_SCHPO (V-type proton ATPase subunit D OS=Schizosaccharomyces pombe GN=vma8 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.069e-11
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  157 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTLFLRMCKMLLLKFDPVKXNIAXV 471
            MA  QR  V PT   L  MK+RL GA  GH+LLK+KS+AL  +FR+I+ NI   K+ MG VM+ ++F++ E    +    +    +  K   L+    + NI+ V
Sbjct:    1 MASKQRENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAKQKMGRVMQIAAFSMAEVGFAMGNNINFEIQQSVKQPRLRVRSKQENISGV 105          
The following BLAST results are available for this feature:
BLAST of GO241608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
VATD2_DROME3.924e-1441.90Probable V-type proton ATPase subunit D 2 OS=Droso... [more]
VATD_MANSE6.694e-1441.90V-type proton ATPase subunit D OS=Manduca sexta PE... [more]
VATD_CAEBR3.322e-1350.00V-type proton ATPase subunit D OS=Caenorhabditis b... [more]
VATD1_DROME5.666e-1340.00V-type proton ATPase subunit D 1 OS=Drosophila mel... [more]
VATD_CAEEL7.401e-1348.72V-type proton ATPase subunit D OS=Caenorhabditis e... [more]
VATD_SCHPO1.069e-1138.10V-type proton ATPase subunit D OS=Schizosaccharomy... [more]

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Properties
Property NameValue
Genbank description256 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 378 5, mRNA sequence.