GO241607

Overview
NameGO241607
Unique NameGO241607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241607 vs. ExPASy Swiss-Prot
Match: PGRC1_MOUSE (Membrane-associated progesterone receptor component 1 OS=Mus musculus GN=Pgrmc1 PE=1 SV=4)

HSP 1 Score: 79.337 bits (194), Expect = 1.708e-14
Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 2
Query:  233 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDW 511
            EP P P ++  + T  EL+++DG    + +LMAI  +++DV++ R FYGP GPY +FAG+DASR LA    ++   KD   D+S L P + E L DW
Sbjct:   61 EPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDW 156          
BLAST of GO241607 vs. ExPASy Swiss-Prot
Match: CB5D2_DANRE (Cytochrome b5 domain-containing protein 2 OS=Danio rerio GN=cyb5d2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.474e-14
Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 2
Query:  266 ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDW 511
            +T+E+L  Y+G  + K L +AI  Q++DV + R  YGPGG Y  F GKDASRA     F E  L+ D+S     ++ AL DW
Sbjct:   54 LTKEQLSLYNGGKNSKGLYLAILGQVFDVEKGRKHYGPGGGYHFFTGKDASRAFITGDFTEAGLSNDVSDFSESQIVALYDW 135          
BLAST of GO241607 vs. ExPASy Swiss-Prot
Match: CB5D2_XENTR (Cytochrome b5 domain-containing protein 2 OS=Xenopus tropicalis GN=cyb5d2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.107e-13
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 2
Query:  242 PPPVQLGE---ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDW 511
            P   +L E   +++EEL  YDG      + +AI  Q++DV +    YGPGG Y+ FAGKDASRA     F EK L  D++ L P ++  L +W
Sbjct:   36 PQQCELSEGRLMSKEELSVYDGGPGSSGIYLAILGQVFDVHKGSKHYGPGGSYSFFAGKDASRAYMTGDFTEKGLVDDVTELSPLQMLHLHNW 128          
BLAST of GO241607 vs. ExPASy Swiss-Prot
Match: PGRC1_PONAB (Membrane-associated progesterone receptor component 1 OS=Pongo abelii GN=PGRMC1 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.446e-13
Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = 2
Query:  233 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDW 511
            EP P P ++  + T  EL+++DG    + +LMAI  +++DV++ R FYGP GPY +FAG+DASR LA    ++   KD   D+S L   + E L DW
Sbjct:   61 EPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDW 156          
BLAST of GO241607 vs. ExPASy Swiss-Prot
Match: PGRC1_HUMAN (Membrane-associated progesterone receptor component 1 OS=Homo sapiens GN=PGRMC1 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.446e-13
Identity = 41/97 (42.27%), Postives = 60/97 (61.86%), Query Frame = 2
Query:  233 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDW 511
            EP P P ++  + T  EL+++DG    + +LMAI  +++DV++ R FYGP GPY +FAG+DASR LA    ++   KD   D+S L   + E L DW
Sbjct:   61 EPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDW 156          
BLAST of GO241607 vs. ExPASy Swiss-Prot
Match: PGRC2_HUMAN (Membrane-associated progesterone receptor component 2 OS=Homo sapiens GN=PGRMC2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.888e-13
Identity = 36/100 (36.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  221 EEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDW 511
            EE      P ++  + + E+L+QYDGS + + +L+A+  +++DV++   FYGP GPY +FAG+DASR LA    ++   +D   D+S L   ++E++++W
Sbjct:   88 EESPATSLPRMKKRDFSLEQLRQYDGSRNPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREW 186          
BLAST of GO241607 vs. ExPASy Swiss-Prot
Match: PGRC2_RAT (Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus GN=Pgrmc2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.220e-13
Identity = 35/100 (35.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  221 EEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDW 511
            EE      P ++  + + E+L+QYDG+ + + +L+A+  +++DV++   FYGP GPY +FAG+DASR LA    ++   +D   D+S L   ++E++++W
Sbjct:   82 EESPAATLPRMKKRDFSLEQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREW 180          
BLAST of GO241607 vs. ExPASy Swiss-Prot
Match: PGRC2_MOUSE (Membrane-associated progesterone receptor component 2 OS=Mus musculus GN=Pgrmc2 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.220e-13
Identity = 35/100 (35.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query:  221 EEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDW 511
            EE      P ++  + + E+L+QYDG+ + + +L+A+  +++DV++   FYGP GPY +FAG+DASR LA    ++   +D   D+S L   ++E++++W
Sbjct:   82 EESPAATLPRMKKRDFSLEQLRQYDGARTPR-ILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDALRDEYDDLSDLNAVQMESVREW 180          
BLAST of GO241607 vs. ExPASy Swiss-Prot
Match: PGRC1_CHICK (Membrane-associated progesterone receptor component 1 OS=Gallus gallus GN=PGRMC1 PE=2 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 3.220e-13
Identity = 44/137 (32.12%), Postives = 74/137 (54.01%), Query Frame = 2
Query:  110 SPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDW 511
            SP     +   L+ +Y +L G         ++ + +  E   P  P ++  + T E+L+ YDG    + +LMA+  +++DV+++  FYGP GPY +FAG+DASR LA    ++   +D   D+S L   + E L+DW
Sbjct:   28 SPLNLSLLGLCLFLLYQILRG---------ERPAAQPGEAGPPPLPKMKRRDFTLEQLRPYDGVRDPR-ILMAVNGKVFDVTRASKFYGPDGPYGIFAGRDASRGLATFCLDKEALRDDYDDLSDLNATQQETLRDW 154          
BLAST of GO241607 vs. ExPASy Swiss-Prot
Match: DAP1_SCHPO (Cytochrome P450 regulator dap1 OS=Schizosaccharomyces pombe GN=dap1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 2
Query:  200 QQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEK-------DLTGDISGLGPFELEALQDW 511
            ++  + +    EP  P  +  + T  ELK+Y+GS +   + +AIK  +Y+V+    FYGP GPY+ FAG DASR LAK SF+++       +   D S L   E +AL DW
Sbjct:   23 RKNEKSFIASEEPKQP--EWRDYTPAELKEYNGSKNSL-VFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNSFDDEFIPDSDAEELDDCSDLNDEERQALNDW 130          
The following BLAST results are available for this feature:
BLAST of GO241607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PGRC1_MOUSE1.708e-1443.30Membrane-associated progesterone receptor componen... [more]
CB5D2_DANRE8.474e-1443.90Cytochrome b5 domain-containing protein 2 OS=Danio... [more]
CB5D2_XENTR1.107e-1340.86Cytochrome b5 domain-containing protein 2 OS=Xenop... [more]
PGRC1_PONAB1.446e-1342.27Membrane-associated progesterone receptor componen... [more]
PGRC1_HUMAN1.446e-1342.27Membrane-associated progesterone receptor componen... [more]
PGRC2_HUMAN1.888e-1336.00Membrane-associated progesterone receptor componen... [more]
PGRC2_RAT3.220e-1335.00Membrane-associated progesterone receptor componen... [more]
PGRC2_MOUSE3.220e-1335.00Membrane-associated progesterone receptor componen... [more]
PGRC1_CHICK3.220e-1332.12Membrane-associated progesterone receptor componen... [more]
DAP1_SCHPO2.087e-1237.84Cytochrome P450 regulator dap1 OS=Schizosaccharomy... [more]

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Properties
Property NameValue
Genbank description255 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 377 5, mRNA sequence.