GO241606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241606 vs. ExPASy Swiss-Prot
Match: SCL7_ARATH (Scarecrow-like protein 7 OS=Arabidopsis thaliana GN=SLC7 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.155e-22 Identity = 65/178 (36.52%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 4 VHIIDFQIGQGSQWITLIQAFAARPGGPP-HIRITGIDDSMSAYARGGGLGIVGKRLSKLAEQFRVPFDFHAANMSGYDVQLENLGVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVEQESNTNTAAFYPRFLEALNYYTAMFESIDVNLARDHKERINIEQ 534 +HI+DF I QG QW L+QA A R G P IRI+GI + G L G RL A + F+F+ + + V P E + VNF L+ + DE+ +T L L + L+P++VTL E E + N F R +L +Y+A+FES++ NL RD KER+ +E+ Sbjct: 274 IHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDETATTVG---TALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVER 448
BLAST of GO241606 vs. ExPASy Swiss-Prot
Match: SCL18_ARATH (Scarecrow-like protein 18 OS=Arabidopsis thaliana GN=SCL18 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.182e-20 Identity = 62/196 (31.63%), Postives = 103/196 (52.55%), Query Frame = 1 Query: 4 VHIIDFQIGQGSQWITLIQAFAARPGGP----PHIRITGIDDSMSAYARGGGLGIVGKRLSKLAEQFRVPFDFHAA-----NMSGYDVQLENLGVQP--GEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVEQESNTNTAAFYPRFLEALNYYTAMFESIDVNLARDHKERINIEQHCLAKGML 558 +HI+D I QG QW L+QA A R P P +RITG ++ GL G RL++ A+ + F FH +++G +Q+ L + GE +AVN LH + ++ + L +K L+ ++VT+ E+E+N +F RF EA+++Y A+F+S++ L + +ER+ +EQ K +L Sbjct: 179 LHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVT------GLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIGH---FLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEIL 365
BLAST of GO241606 vs. ExPASy Swiss-Prot
Match: SCL23_ARATH (Scarecrow-like protein 23 OS=Arabidopsis thaliana GN=SCL23 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.664e-20 Identity = 65/179 (36.31%), Postives = 95/179 (53.07%), Query Frame = 1 Query: 4 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSMSAYARGGGLGIVGKRLSKLAEQFRVPFDFH-AANMSGYDVQLENLGVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVEQE-SNTNTAAFYPRFLEALNYYTAMFESIDVNLARDHKERINIEQ 534 VHIID + QG QW L A+RP IRITG S L G+RL+ A +PF+FH + G + L + GEAV V+ +M H + D V+ N L +++RL P ++T+VEQE S + +F RF+EAL+YY+A+F+++ L + ER +EQ Sbjct: 152 VHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDL------LASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVH--WMQHRLYD--VTGNNL--ETLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQ 318
BLAST of GO241606 vs. ExPASy Swiss-Prot
Match: SCL31_ARATH (Scarecrow-like protein 31 OS=Arabidopsis thaliana GN=SCL31 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.478e-19 Identity = 53/178 (29.78%), Postives = 92/178 (51.69%), Query Frame = 1 Query: 4 VHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSMSAYARGGGLGIVGKRLSKLAEQFRVPFDFHAANMSGYD-VQLENLGVQPGEAVAVNFAFMLHHVPDESVSTENY-RDRLLMLVKRLSPKVVTLVEQESNTNTAAFYPRFLEALNYYTAMFESIDVNLARDHKERINIE 531 +HI+DF I G QW IQ + G +RITGI+ + G+RL++ ++F VPF+++A ++ +++E ++P E +AVN ++ D E+ RD L L++ ++P V + N F RF EAL +Y+A+F+ L++++ ERI+ E Sbjct: 394 LHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFE 571 HSP 2 Score: 28.4906 bits (62), Expect = 1.478e-19 Identity = 10/16 (62.50%), Postives = 15/16 (93.75%), Query Frame = 3 Query: 552 DVVNIIACEGPERIER 599 +V+N+IACEG +R+ER Sbjct: 578 EVMNVIACEGVDRVER 593
BLAST of GO241606 vs. ExPASy Swiss-Prot
Match: NSP2_MEDTR (Nodulation-signaling pathway 2 protein OS=Medicago truncatula GN=NSP2 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.888e-18 Identity = 58/182 (31.87%), Postives = 97/182 (53.30%), Query Frame = 1 Query: 1 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSMSAYARGGGLGIVGKRLSKLAEQFRVPFDFHAANMSGYDV-QLENLGVQPGEAVAVNFAFMLHHVP---DESVSTENYRDRLLMLVKRLSPKVVTLVEQESNTNTAAFYPRFLEALNYYTAMFESIDVNLARDHKERINIEQ 534 RVH+ID+ I +G QW +LIQ+ A+ GP H+RIT + + + + G+RL+ A PF FH + + + L + GEA+ N L H+ ESV++ L K L+PK+VTLVE+E + F RF+++L++Y+A+F+S++ ++ R +E+ Sbjct: 239 RVHVIDYDIMEGVQWASLIQSLASNNNGP-HLRITALSRTGTGRRSIATVQETGRRLTSFAASLGQPFSFHHCRLDSDETFRPSALKLVRGEALVFNCMLNLPHLSYRAPESVAS------FLNGAKTLNPKLVTLVEEEVGSVIGGFVERFMDSLHHYSAVFDSLEAGFPMQNRARTLVER 413
BLAST of GO241606 vs. ExPASy Swiss-Prot
Match: SCL26_ARATH (Scarecrow-like protein 26 OS=Arabidopsis thaliana GN=SCL26 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.649e-17 Identity = 57/184 (30.98%), Postives = 93/184 (50.54%), Query Frame = 1 Query: 1 RVHIIDFQIGQGSQWITLIQAFAARPGGP--PHIRITGIDDSMSAYARGGGLGIVGKRLSKLAEQFRVPFDFHAANMSGYDVQLENLGVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVEQESN-TNTAAFYPRFLEALNYYTAMFESIDVNL-----ARDHKERINI 528 R+HI+D+ I +G QW +L+QA +R GP H+RIT + + + + G+RL+ A+ PF + + +L + GEAV +N + H+P S T + L K L+PK+VTLV +E F RF++ L+ ++A+F+S++ L AR ER+ I Sbjct: 214 RIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTAFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVIN---CMLHLPRFSHQTPSSVISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVERVFI 394
BLAST of GO241606 vs. ExPASy Swiss-Prot
Match: SHR_ARATH (Protein SHORT-ROOT OS=Arabidopsis thaliana GN=SHR PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.496e-15 Identity = 57/196 (29.08%), Postives = 98/196 (50.00%), Query Frame = 1 Query: 1 RVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITG-------IDDSMSAYARGGGLGIVGKRLSKLAEQFRVPFDF----HAANMSGYDVQLENLGVQPGEAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVEQESN---TNTAAFYPRFL----EALNYYTAMFESIDVNLARDHKERINIEQ 534 ++HI+D +QW TL++A A R PH+R+T ++D +++ + +G R+ K A VPF F H ++S +D L L V+P E +A+N +H + S + RD ++ +RL P++VT+VE+E++ F FL E L ++ FES + + R ER+ +E+ Sbjct: 255 KIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRM---MKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFD--LNELDVKPDEVLAINCVGAMHGI----ASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLER 441
BLAST of GO241606 vs. ExPASy Swiss-Prot
Match: SHR2_ORYSJ (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica GN=SHR2 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.388e-13 Identity = 60/197 (30.46%), Postives = 97/197 (49.24%), Query Frame = 1 Query: 1 RVHIIDFQIGQGSQWITLIQAFAARPGGP-PHIRITGIDDSMSAYARGGG-LGIVGKRLSKLAEQFRVPFDFHAANMSG--YDVQLENLGVQPG---EAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVEQESN------------TNTAAFYPRFLEALNYYTAMFESIDVNLARDHKERINIEQ 534 R+HI+D +QW TL++A A R PH+ IT + + + A + +G+RL K A VPF F A + SG D+ L L ++ G A+AVN L V RD + ++RL P+VVT+VE+E++ AAF F E L +++A +S++ + + ER+++E+ Sbjct: 317 RLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLAALDLREGGATAALAVNCVNALRGVA-------RGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLER 506
BLAST of GO241606 vs. ExPASy Swiss-Prot
Match: SHR2_ORYSI (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica GN=SHR2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.320e-13 Identity = 59/197 (29.95%), Postives = 97/197 (49.24%), Query Frame = 1 Query: 1 RVHIIDFQIGQGSQWITLIQAFAARPGGP-PHIRITGIDDSMSAYARGGG-LGIVGKRLSKLAEQFRVPFDFHAANMSG--YDVQLENLGVQPG---EAVAVNFAFMLHHVPDESVSTENYRDRLLMLVKRLSPKVVTLVEQESN------------TNTAAFYPRFLEALNYYTAMFESIDVNLARDHKERINIEQ 534 R+HI+D +QW TL++A A R PH+ IT + + + A + +G+RL K A VPF F A + +G D+ L L ++ G A+AVN L V RD + ++RL P+VVT+VE+E++ AAF F E L +++A +S++ + + ER+++E+ Sbjct: 317 RLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLAALDLREGGATAALAVNCVNALRGVA-------RGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLER 506
BLAST of GO241606 vs. ExPASy Swiss-Prot
Match: MOC_ORYSJ (Protein MONOCULM 1 OS=Oryza sativa subsp. japonica GN=MOC1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12 Identity = 60/214 (28.04%), Postives = 87/214 (40.65%), Query Frame = 1 Query: 1 RVHIIDFQIGQGSQWITLIQAFAARPG---GPPHIRITGIDDSMSAYARGGGLGIVGKRLSKLAEQFRVPFDF--------------------HAANMSGYDVQLENLGVQPGEAVAVNFAFMLHHVP--DESVSTENYRDRLLMLVKRLSPKVVTLVEQESNTNTAA------FYPRFLEALNYYTAMFESIDVNLARDHKERINIEQHCLAK 549 RVHI+D G QW L+QA A R GPP +R+TG R G RL A +PF F AA + L P E +AVN LH++ DE + L VK +SP VVT+ E+E+ R A+++Y+A+FE+++ + +ER+ +EQ L + Sbjct: 157 RVHILDLDAVHGVQWPPLLQAIAERADPALGPPEVRVTGAGADRDTLLR------TGNRLRAFARSIHLPFHFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNLAGHDELAA-------FLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGR 357 The following BLAST results are available for this feature:
BLAST of GO241606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
|