GO241605

Overview
NameGO241605
Unique NameGO241605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXF_MESCR (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.928e-14
Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 1
Query:  145 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVD-ELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVE 399
            A  K +V+D    WC PCK+M+P   ELA+KL  V+FLK++ + E K +A+E  +  +PTF + K GK+++ + GAK D+L  A+E
Sbjct:  101 AGDKPVVLDMYTQWCGPCKVMAPKYQELAEKLLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKGGKIVDEVTGAKFDKLVAAIE 186          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRX2_YEAST (Thioredoxin-2 OS=Saccharomyces cerevisiae GN=TRX2 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.166e-13
Identity = 33/81 (40.74%), Postives = 55/81 (67.90%), Query Frame = 1
Query:  154 KLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAV 396
            KL+VVDF A+WC PCK+++P++ + A++     F K++VDE+  VA++  V +MPT +  K GK + R+VGA    ++ A+
Sbjct:   20 KLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIKQAI 100          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO2_DROME (Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.523e-13
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 1
Query:  103 HTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQ 387
            H     + QL K  A+ KL+V+DF A+WC PCK++SP L EL+ +    V+ LKV+VDE + +A E+ + +MPTFV  K G  +E   GA    L+
Sbjct:   14 HLQADLDGQLTK--ASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLE 107          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: GLRX3_XENTR (Glutaredoxin-3 OS=Xenopus tropicalis GN=glrx3 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.523e-13
Identity = 35/89 (39.33%), Postives = 58/89 (65.17%), Query Frame = 1
Query:  145 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERHAT 411
            +AK L VV F A W P C  M+ +++ELAK+ P V+F+K+  + +  V+E++ V ++PTF+  K  + ++R+ GA   EL   V+RHA+
Sbjct:   20 SAKSLTVVHFWAPWAPQCTQMNEVMAELAKEQPQVMFVKLEAEAVPEVSEKYEVTSVPTFLFFKNSQKIDRLDGAHAPELTKRVQRHAS 108          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRX2_SCHPO (Thioredoxin-2, mitochondrial OS=Schizosaccharomyces pombe GN=trx2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.393e-13
Identity = 37/89 (41.57%), Postives = 58/89 (65.17%), Query Frame = 1
Query:  103 HTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGA 369
            + VES+ +   + I+A K+ VVDF A WC PCK + P L +L+++     F+ VN D+   +A++  V A+PT VL ++G+ L+RIVGA
Sbjct:   20 NAVESFGDYNTR-ISADKVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIVGA 107          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO_EMENI (Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.393e-13
Identity = 36/97 (37.11%), Postives = 58/97 (59.79%), Query Frame = 1
Query:  109 VESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVE 399
            + S  E  +K + AK  +VVD  A+WC PCK ++P + + A+      F +++VDEL  VA E  + AMPTF+L K+G+ +  +VGA    L+  ++
Sbjct:   10 ITSKAEFQEKVLNAKGFVVVDCFATWCGPCKAIAPTVEKFAQTYTDASFYQIDVDELSEVAAELGIRAMPTFLLFKDGQKVSDVVGANPGALEAGIK 106          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO_CYACA (Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13
Identity = 33/90 (36.67%), Postives = 64/90 (71.11%), Query Frame = 1
Query:  142 IAAKKLIVVDFTASWCPPCKLMSPILSELAKK-LPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGA-KKDELQLAVERH 405
            + ++KL++VDF A WC PC+++SP++ ELA++ +  V  +K+N DE  S++ E+ + ++PT +L K+GK ++ ++GA  K  L  A++++
Sbjct:   17 VNSEKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKY 106          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TXL1_SCHPO (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe GN=txl1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13
Identity = 39/101 (38.61%), Postives = 55/101 (54.46%), Query Frame = 1
Query:   91 VISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKL--PAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQ 387
            VI   + + W   + K       + VD  A WC PCK +SP+ S+LA K   P  +F KVNVDE + +A    V+AMPTFV  + GK ++ + GA    L+
Sbjct:    3 VIEIRSYQHWISTIPKS----GYLAVDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQIDMLTGANPQALK 99          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXF_PEA (Thioredoxin F-type, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13
Identity = 32/86 (37.21%), Postives = 59/86 (68.60%), Query Frame = 1
Query:  145 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVD-ELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVE 399
            A  K +V+D    WC PCK+++P+  EL++K   V+FLK++ + + KS+A+E  ++ +PTF + K+ K+++ + GAK D+L  A++
Sbjct:   92 AGDKTVVLDMFTKWCGPCKVIAPLYEELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAID 177          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: GLRX5_SCHPO (Monothiol glutaredoxin-5 OS=Schizosaccharomyces pombe GN=grx5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.871e-13
Identity = 36/99 (36.36%), Postives = 58/99 (58.59%), Query Frame = 1
Query:  109 VESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERH 405
            VE + E LQ G   +++I+++F A W  PCK M+ +  + AK     +FLK+  ++   +AE + V A+P FVL    KVL RI GA   +L+ A++ +
Sbjct:    8 VEQFQEILQNG--KEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPLFVLIHGAKVLARISGANPQKLKAAIDEY 104          
The following BLAST results are available for this feature:
BLAST of GO241605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
TRXF_MESCR8.928e-1443.02Thioredoxin F-type, chloroplastic OS=Mesembryanthe... [more]
TRX2_YEAST1.166e-1340.74Thioredoxin-2 OS=Saccharomyces cerevisiae GN=TRX2 ... [more]
THIO2_DROME1.523e-1342.71Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 ... [more]
GLRX3_XENTR1.523e-1339.33Glutaredoxin-3 OS=Xenopus tropicalis GN=glrx3 PE=2... [more]
TRX2_SCHPO3.393e-1341.57Thioredoxin-2, mitochondrial OS=Schizosaccharomyce... [more]
THIO_EMENI3.393e-1337.11Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV... [more]
THIO_CYACA4.431e-1336.67Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV... [more]
TXL1_SCHPO5.787e-1338.61Thioredoxin-like protein 1 OS=Schizosaccharomyces ... [more]
TRXF_PEA5.787e-1337.21Thioredoxin F-type, chloroplastic OS=Pisum sativum... [more]
GLRX5_SCHPO9.871e-1336.36Monothiol glutaredoxin-5 OS=Schizosaccharomyces po... [more]

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Properties
Property NameValue
Genbank description253 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 375 5, mRNA sequence.