GO241605

Overview
NameGO241605
Unique NameGO241605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: GLRX3_MOUSE (Glutaredoxin-3 OS=Mus musculus GN=Glrx3 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.289e-12
Identity = 38/116 (32.76%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   76 AEEGQ----VISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERHAT 411
            AE G+    V+   + + + E L+  +  K L+VV F A W P C  M+ +++ELAK+ P V F+K+  + +  V+E++ + ++PTF+  K  + ++R+ GA   EL   V+RH +
Sbjct:    6 AEAGEAAVAVVEVGSAQQFEELLR--LKTKSLLVVHFWAPWAPQCVQMNDVMAELAKEHPHVSFVKLEAEAVPEVSEKYEISSVPTFLFFKNSQKVDRLDGAHAPELTKKVQRHVS 119          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: GLRX3_BOVIN (Glutaredoxin-3 OS=Bos taurus GN=GLRX3 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.684e-12
Identity = 33/90 (36.67%), Postives = 57/90 (63.33%), Query Frame = 1
Query:  142 IAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERHAT 411
            + AK L+VV F A W P C  M+ +++ELAK+   V F+K+  + +  V+E++ + ++PTF+  K  + ++R+ GA   EL   V+RHA+
Sbjct:   27 LRAKSLLVVHFWAPWAPQCAQMNDVMAELAKEHQQVSFVKLEAEAVPEVSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHAS 116          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO_ICTPU (Thioredoxin OS=Ictalurus punctatus GN=txn PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12
Identity = 35/89 (39.33%), Postives = 52/89 (58.43%), Query Frame = 1
Query:  145 AAKKLIVVDFTASWCPPCKLMSPILSELAKK--LPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERH 405
            A  KL+VVDFTA+WC PC+ + PI   L+K      V+FLKV+VD+   V+    ++ MPTF   K G+ ++   GA +  L+  +  H
Sbjct:   18 AGDKLVVVDFTATWCGPCQKIGPIFETLSKSEDYQNVVFLKVDVDDAADVSSHCDIKCMPTFHFYKNGQKIDEFSGANEQTLKQKINDH 106          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12
Identity = 28/86 (32.56%), Postives = 52/86 (60.47%), Query Frame = 1
Query:  148 AKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERH 405
            A +LI++DF A+WC PC+++SPI  + + +     FLKVN D  + + + + + AMPTF+  K  + ++ + GA +  +   + +H
Sbjct:   21 ANRLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGANQQAIAEKIRQH 106          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXF1_ARATH (Thioredoxin F-type 1, chloroplastic OS=Arabidopsis thaliana GN=At3g02730 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.872e-12
Identity = 32/86 (37.21%), Postives = 57/86 (66.28%), Query Frame = 1
Query:  145 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVD-ELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVE 399
            A +KL+V+D    WC PCK+++P    L++K   V+FLK++ + + + +A+E  +  +PTF + K+ KV++ + GAK D+L  A+E
Sbjct:   85 AGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIE 170          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: GLRX3_RAT (Glutaredoxin-3 OS=Rattus norvegicus GN=Glrx3 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.872e-12
Identity = 35/107 (32.71%), Postives = 63/107 (58.88%), Query Frame = 1
Query:   91 VISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERHAT 411
            V+   +   + E L+  +  K L+VV F A W P C  M+ +++ELAK+ P V F+K+  + +  V+E++ + ++PTF+  K  + ++R+ GA   EL   V+RH +
Sbjct:   15 VVEVGSARQFEELLR--LKTKSLLVVHFWAPWAPQCVQMNDVMAELAKEHPHVSFVKLEAEAVPEVSEKYEISSVPTFLFFKNSQKVDRLDGAHAPELTKKVQRHVS 119          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEBR (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis briggsae GN=png-1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.751e-12
Identity = 32/95 (33.68%), Postives = 56/95 (58.95%), Query Frame = 1
Query:  121 NEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERH 405
            NE L+K   + +LI+VDF A+WC PC+++SP    L+ +     FLKVN D  + +   +++ AMPTF+  K  + ++ + GA +  +   + +H
Sbjct:   13 NEILEKS-DSNRLIIVDFFANWCGPCRMISPAFERLSMEFGNATFLKVNTDLARDIVMRYSISAMPTFLFFKNKQQVDSVRGANESAIISTIRKH 106          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXF2_ARATH (Thioredoxin F-type 2, chloroplastic OS=Arabidopsis thaliana GN=At5g16400 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.899e-12
Identity = 31/86 (36.05%), Postives = 57/86 (66.28%), Query Frame = 1
Query:  145 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVD-ELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVE 399
            A  K++V+D    WC PCK+++P   EL++K   ++FLK++ + + K +A+E  +  +PTF + K+ KV++ + GAK ++L  A+E
Sbjct:   95 AGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLLAAIE 180          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO_PENCH (Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.899e-12
Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 1
Query:  109 VESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVE 399
            ++S  E  +K   A   +VVDF A+WC PCK ++P L +L++    + F KV+VDEL  VA    V AMPTF   K G+  E + GA    +Q  V+
Sbjct:    6 IKSVAEYKEKVTDATGPVVVDFHATWCGPCKAIAPALEKLSETHTGIQFYKVDVDELSEVAASNGVSAMPTFHFYKGGERNEEVKGANPAAIQAGVK 102          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXF_BRANA (Thioredoxin F-type, chloroplastic OS=Brassica napus GN=TRXF PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.398e-12
Identity = 31/86 (36.05%), Postives = 57/86 (66.28%), Query Frame = 1
Query:  145 AAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVD-ELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVE 399
            A +K++V+D    WC PCK+++P    L++K   V+FLK++ + E + +A+E  +  +PTF + K+ +V++ + GAK D+L  A+E
Sbjct:   88 AGEKIVVLDMYTQWCGPCKVIAPKYKALSEKYEDVVFLKLDCNPENRPLAKELGIRVVPTFKILKDNQVVKEVTGAKYDDLVAAIE 173          
The following BLAST results are available for this feature:
BLAST of GO241605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLRX3_MOUSE1.289e-1232.76Glutaredoxin-3 OS=Mus musculus GN=Glrx3 PE=1 SV=1[more]
GLRX3_BOVIN1.684e-1236.67Glutaredoxin-3 OS=Bos taurus GN=GLRX3 PE=2 SV=1[more]
THIO_ICTPU2.199e-1239.33Thioredoxin OS=Ictalurus punctatus GN=txn PE=3 SV=... [more]
NGLY1_CAEEL2.199e-1232.56Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]
TRXF1_ARATH2.872e-1237.21Thioredoxin F-type 1, chloroplastic OS=Arabidopsis... [more]
GLRX3_RAT2.872e-1232.71Glutaredoxin-3 OS=Rattus norvegicus GN=Glrx3 PE=1 ... [more]
NGLY1_CAEBR3.751e-1233.68Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]
TRXF2_ARATH4.899e-1236.05Thioredoxin F-type 2, chloroplastic OS=Arabidopsis... [more]
THIO_PENCH4.899e-1240.21Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=... [more]
TRXF_BRANA6.398e-1236.05Thioredoxin F-type, chloroplastic OS=Brassica napu... [more]

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Properties
Property NameValue
Genbank description253 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 375 5, mRNA sequence.