GO241605

Overview
NameGO241605
Unique NameGO241605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO_MYCGE (Thioredoxin OS=Mycoplasma genitalium GN=trxA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.147e-11
Identity = 31/81 (38.27%), Postives = 51/81 (62.96%), Query Frame = 1
Query:  124 EQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVG 366
            +QL++  +AKK ++VDF A+WC PCKL SP   + A +     F+KVNVD+   +A  + + ++PT V+ + G   +R +G
Sbjct:    9 KQLEEIFSAKKNVIVDFWAAWCGPCKLTSPEFQKAADEFSDAQFVKVNVDDHTDIAAAYNITSLPTIVVFENGVEKKRAIG 89          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO1_DROME (Thioredoxin-1 OS=Drosophila melanogaster GN=dhd PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.147e-11
Identity = 34/97 (35.05%), Postives = 59/97 (60.82%), Query Frame = 1
Query:   97 SCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPA-VIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDEL 384
            S  T+  ++++++   A  KLIV+DF A+WC PCK M   +  LA+K  +  + LK++VD+ + + E + V +MPTFV  ++ + L    GA + +L
Sbjct:    3 SVRTMNDYHKRIEA--ADDKLIVLDFYATWCGPCKEMESTVKSLARKYSSKAVVLKIDVDKFEELTERYKVRSMPTFVFLRQNRRLASFAGADEHKL 97          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO_MYCPN (Thioredoxin OS=Mycoplasma pneumoniae GN=trxA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.417e-11
Identity = 29/81 (35.80%), Postives = 49/81 (60.49%), Query Frame = 1
Query:  124 EQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVG 366
            +QL +  A+   +++DF A WC PCK+  P  ++ A ++  V F KVNVDE   +A  + + ++PT VL ++G+   R +G
Sbjct:    9 KQLGELFASNNKVIIDFWAEWCGPCKITGPEFAKAASEVSTVAFAKVNVDEQTDIAAAYKITSLPTIVLFEKGQEKHRAIG 89          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO_CYAME (Thioredoxin OS=Cyanidioschyzon merolae GN=trxA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.417e-11
Identity = 32/83 (38.55%), Postives = 57/83 (68.67%), Query Frame = 1
Query:  121 NEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGA 369
            NE LQ    ++KL++VDF A WC PC+++ PIL E+AK+    + ++VN DE  ++A  + + ++PT +L K+G+ ++ ++GA
Sbjct:   11 NEVLQ----SEKLVLVDFWAPWCGPCRMIGPILEEIAKEFNLKV-VQVNTDENPNLATFYGIRSIPTLMLFKKGQRVDTVIGA 88          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO_TREPA (Thioredoxin OS=Treponema pallidum GN=trxA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11
Identity = 31/95 (32.63%), Postives = 61/95 (64.21%), Query Frame = 1
Query:  130 LQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKL-PAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVG-AKKDELQLAVERHA 408
            ++K I    L++VDF A WC  CK++ P+L E+  ++   V+  K+NVD+ + +A E+ V ++PT ++ K+GK ++R +G   K ++   ++++A
Sbjct:   11 VRKTIETNPLVIVDFWAPWCGSCKMLGPVLEEVESEVGSGVVIGKLNVDDDQDLAVEFNVASIPTLIVFKDGKEVDRSIGFVDKSKILTLIQKNA 105          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO_MYCTU (Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11
Identity = 30/78 (38.46%), Postives = 54/78 (69.23%), Query Frame = 1
Query:  142 IAAKKLIVVDFTASWCPPCKLMSPILSELA-KKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAK 372
            +++ K ++VDF A+WC PCK+++P+L E+A ++   +   K++VD     A  + V ++PT +L K+G+ ++RIVGAK
Sbjct:   22 LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAK 99          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: THIO_MYCBO (Thioredoxin OS=Mycobacterium bovis GN=trxA PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11
Identity = 30/78 (38.46%), Postives = 54/78 (69.23%), Query Frame = 1
Query:  142 IAAKKLIVVDFTASWCPPCKLMSPILSELA-KKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAK 372
            +++ K ++VDF A+WC PCK+++P+L E+A ++   +   K++VD     A  + V ++PT +L K+G+ ++RIVGAK
Sbjct:   22 LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAK 99          
The following BLAST results are available for this feature:
BLAST of GO241605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
THIO_MYCGE4.147e-1138.27Thioredoxin OS=Mycoplasma genitalium GN=trxA PE=3 ... [more]
THIO1_DROME4.147e-1135.05Thioredoxin-1 OS=Drosophila melanogaster GN=dhd PE... [more]
THIO_MYCPN5.417e-1135.80Thioredoxin OS=Mycoplasma pneumoniae GN=trxA PE=3 ... [more]
THIO_CYAME5.417e-1138.55Thioredoxin OS=Cyanidioschyzon merolae GN=trxA PE=... [more]
THIO_TREPA9.239e-1132.63Thioredoxin OS=Treponema pallidum GN=trxA PE=3 SV=... [more]
THIO_MYCTU9.239e-1138.46Thioredoxin OS=Mycobacterium tuberculosis GN=trxA ... [more]
THIO_MYCBO9.239e-1138.46Thioredoxin OS=Mycobacterium bovis GN=trxA PE=3 SV... [more]

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Properties
Property NameValue
Genbank description253 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 375 5, mRNA sequence.