GO241597

Overview
NameGO241597
Unique NameGO241597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of GO241597 vs. ExPASy Swiss-Prot
Match: TCTP_BRABE (Translationally-controlled tumor protein homolog OS=Branchiostoma belcheri PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.235e-11
Identity = 51/169 (30.18%), Postives = 81/169 (47.93%), Query Frame = 3 
Query:  117 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQ-GAVDVD-IGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE---ERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYIADALK 608
            M++Y+D+++GDE+ SD++  K  ++   +E+EGK   + G +D   IG N S                  +IV   RLQE   F K Q+  Y+K + K +   L++   ER + FK       K ++    + QFF GE M  DG +    Y+E    P  L+  D L+
Sbjct:    1 MIIYKDIVSGDEMFSDAYKMKVLDD-YFYELEGKITTEKGGIDESAIGGNASAEDAVEGLEESGTTG--CNIVIAQRLQETQ-FTKAQYKVYIKDYSKKVLEYLTKNKPERVDGFKAASAAGMKRVMGNFKNWQFFTGEKMDQDGMVALMDYREDGKTPYMLFFKDGLE 165
The following BLAST results are available for this feature:
BLAST of GO241597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
TCTP_BRABE2.235e-1130.18Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank description245 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 364 5, mRNA sequence.