GO241595

Overview
NameGO241595
Unique NameGO241595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C22_ORYSJ (Putative protein phosphatase 2C 22 OS=Oryza sativa subsp. japonica GN=Os02g0607500 PE=3 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 7.156e-26
Identity = 71/199 (35.68%), Postives = 102/199 (51.26%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLD--DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPND-------------WAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG 552
            G R +M+DA A   DLD   STSFFGVYDGHGG  VA +CAK  H  + + +++   ++  ++     R+D+ ++    WR                   ++  R  +S+ + +D             W   E           GSTACV IIR N + V N GDSRCV+S+ GQA +LS DHKP++  E++RIL+ GG
Sbjct:  110 GLRMSMQDALAVELDLDALKSTSFFGVYDGHGGAEVAMYCAKRFHVMLREEESF-LNNLSYAITSVCSRLDDELEAPNVWR-----------------ASLYPHRSSESSSESSDCFQFLSTGSCANVWRSSEAVSYKLPS-YEGSTACVVIIRGNQITVGNVGDSRCVLSKNGQAIDLSTDHKPNVPLERQRILRVGG 289          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 3.552e-25
Identity = 71/206 (34.47%), Postives = 101/206 (49.03%), Query Frame = 1
Query:    1 GWRATMEDAHA---AYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR  MEDAH    + PD D   +FF VYDGHGG  V+++    LH++V+  K ++ G++  +++K F  +D+ M+                                           +E    D     SG+TA V +I+   +   NAGDSR V S  G+A  LS DHKP  E E  RI+ AGG++   RVNG+L L+RA+GD
Sbjct:   31 GWRVDMEDAHTHLLSLPD-DPKCAFFAVYDGHGGSKVSQYSGINLHKKVVAQKEFSEGNMKEAIEKGFLELDQQMR------------------------------------------VDEETKDD----VSGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRIIAAGGWVEFNRVNGNLALSRALGD 189          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.263e-22
Identity = 71/218 (32.57%), Postives = 97/218 (44.50%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLD---DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGD------------VGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR  MEDAH A   +    D+ SFF VYDGH G  VA +C+  L + +  N+ + A D            V T ++  F ++DE M+                 F+ +  G+                              SGSTA   ++   H+   N GDSR V+ R GQ    ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD
Sbjct:   31 GWRVEMEDAHTAVVGIPHGLDNWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGSALEPSVESVKTGIRTGFLKIDEYMRN----------------FSDLRNGM----------------------------DRSGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVMIQRVNGSLAVSRALGD 204          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.800e-22
Identity = 71/218 (32.57%), Postives = 96/218 (44.04%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLD---DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGD------------VGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR  MEDAH A   +    +  SFF VYDGH G  VA +C+  L + +  N+ + A D            V T ++  F ++DE M+                 F+ +  G+                              SGSTA   +I   H+   N GDSR V+ R GQ    ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD
Sbjct:   31 GWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGFALEPSVENVKTGIRTGFLKIDEYMRN----------------FSDLRNGM----------------------------DRSGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVMIQRVNGSLAVSRALGD 204          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.824e-21
Identity = 69/207 (33.33%), Postives = 100/207 (48.31%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLD---DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAY-AAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR  MEDAH A   +    +  SFF VYDGH G  VA +C+  L + +  N+ + AAG  G++++ +   ++ +  G R       + + +  F+ +  G+                              SGSTA   +I   H+   N GDSR V+ R GQ    ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD
Sbjct:   31 GWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITNNEDFRAAGKSGSALEPS---VENVKNGIR--TGFLKIDEYMRNFSDLRNGM----------------------------DRSGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGD 204          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.111e-21
Identity = 69/207 (33.33%), Postives = 100/207 (48.31%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLD---DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAY-AAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR  MEDAH A   +    +  SFF VYDGH G  VA +C+  L + +  N+ + AAG  G++++ +   ++ +  G R       + + +  F+ +  G+                              SGSTA   +I   H+   N GDSR V+ R GQ    ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD
Sbjct:   31 GWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELS---VENVKNGIR--TGFLKIDEYMRNFSDLRNGM----------------------------DRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGD 204          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PP2C2_YEAST (Protein phosphatase 2C homolog 2 OS=Saccharomyces cerevisiae GN=PTC2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.111e-21
Identity = 66/208 (31.73%), Postives = 101/208 (48.56%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDL-----DDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR +MED+H   P++      D  +F+G++DGHGG  VA++C   + + + + K++  G++  ++   F   D           + +L D + K                                D +G T+  T+ +     N L+  NAGDSR V++  G A  LS DHKP L +EK RI+ A GF+   RVNG+L L+RAIGD
Sbjct:   31 GWRMSMEDSHILEPNVLTKSDKDHIAFYGIFDGHGGAKVAEYCGNKIVEILQEQKSFHEGNLPRALIDTFINTD-----------VKLLQDPVMK-------------------------------EDHSGCTA--TSILVSKSQNLLVCGNAGDSRTVLATDGNAKALSYDHKPTLASEKSRIVAADGFVEMDRVNGNLALSRAIGD 194          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.064e-21
Identity = 72/213 (33.80%), Postives = 97/213 (45.54%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLD---DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAY--AAG-----DVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR  MEDAH A   L    ++ SFF VYDGH G  VAK+C + L   +  N+ +  +AG     +V   ++  F  +DE M+         V+ +K                G D                      SGSTA   +I   H    N GDSR ++ R  + Y  ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD
Sbjct:   31 GWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMR---------VMSEK--------------KHGADR---------------------SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGD 199          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C30_ORYSJ (Probable protein phosphatase 2C 30 OS=Oryza sativa subsp. japonica GN=Os03g0268600 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.064e-21
Identity = 79/206 (38.35%), Postives = 98/206 (47.57%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG---FIHAGRVNGSLNLARAIGD 609
            G R  MED+ +A P       FFGV+DGHG   VA  C + +H+ V+     AAG  G         +DE  +    WR     G     F  M    + S RG  +   P      + P  D  G    STA VA++   H++VAN GDSR V+ R G A  LS DHKPD   E ERI  AGG   F    RV G L ++RAIGD
Sbjct:   85 GRRRDMEDSVSACPGFLPGHHFFGVFDGHGCSHVATSCGQRMHEIVVDEAGAAAGSAG---------LDEEAR----WR-----GVMERSFARMDAEAVASSRGSVA-PAPTCRCEMQLPKCDHVG----STAVVAVLGPRHVVVANCGDSRAVLCRGGAAIPLSCDHKPDRPDELERIHAAGGRVIFWDGARVFGMLAMSRAIGD 267          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.931e-21
Identity = 72/213 (33.80%), Postives = 97/213 (45.54%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLD---DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAY--AAG-----DVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR  MEDAH A   L    +S SFF VYDGH G  VAK+C + L   +  N+ +  +AG     +V   ++  F  +DE M+         V+ +K                G D                      SGSTA   +I   H    N GDSR ++ R  + +  ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD
Sbjct:   31 GWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMR---------VMSEK--------------KHGADR---------------------SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGD 199          
The following BLAST results are available for this feature:
BLAST of GO241595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
P2C22_ORYSJ7.156e-2635.68Putative protein phosphatase 2C 22 OS=Oryza sativa... [more]
PP2C2_CAEEL3.552e-2534.47Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]
PPM1B_MOUSE1.263e-2232.57Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
PPM1B_RAT4.800e-2232.57Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
PPM1B_BOVIN1.824e-2133.33Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
PPM1B_HUMAN3.111e-2133.33Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
PP2C2_YEAST3.111e-2131.73Protein phosphatase 2C homolog 2 OS=Saccharomyces ... [more]
PPM1A_BOVIN4.064e-2133.80Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2... [more]
P2C30_ORYSJ4.064e-2138.35Probable protein phosphatase 2C 30 OS=Oryza sativa... [more]
PPM1A_HUMAN6.931e-2133.80Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE... [more]

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Properties
Property NameValue
Genbank description243 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 362 5, mRNA sequence.