GO241595

Overview
NameGO241595
Unique NameGO241595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PP2C3_YEAST (Protein phosphatase 2C homolog 3 OS=Saccharomyces cerevisiae GN=PTC3 PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.182e-20
Identity = 67/211 (31.75%), Postives = 99/211 (46.92%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDL-----DDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMD-EMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRN--NHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR +MEDAH   P+L     ++  +F+G++DGHGG  VA+FC   +   + K +++ +G +   +   F   D E++K ++                                                    SG TA V ++      LI AN+GDSR V+S  G +  +S DHKP L +EK RI+ A GF+   RVNG+L L+RAIGD
Sbjct:   31 GWRMSMEDAHIVEPNLLAESDEEHLAFYGIFDGHGGSSVAEFCGSKMISILKKQESFKSGMLEQCLIDTFLATDVELLKDEK-----------------------------------------------LKDDHSGCTATVILVSQLKKLLICANSGDSRTVLSTGGNSKAMSFDHKPTLLSEKSRIVAADGFVEMDRVNGNLALSRAIGD 194          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PPM1A_RAT (Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.544e-20
Identity = 71/213 (33.33%), Postives = 97/213 (45.54%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLD---DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAY--AAG-----DVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR  MEDAH A   L    ++ SFF VYDGH G  VAK+C + L   +  N+ +  +AG     +V   ++  F  +DE M+         V+ +K                G D                      SGSTA   +I   H    N GDSR ++ R  + +  ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD
Sbjct:   31 GWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMR---------VMSEK--------------KHGADR---------------------SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGD 199          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.544e-20
Identity = 71/213 (33.33%), Postives = 97/213 (45.54%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLD---DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAY--AAG-----DVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR  MEDAH A   L    ++ SFF VYDGH G  VAK+C + L   +  N+ +  +AG     +V   ++  F  +DE M+         V+ +K                G D                      SGSTA   +I   H    N GDSR ++ R  + +  ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD
Sbjct:   31 GWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMR---------VMSEK--------------KHGADR---------------------SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGD 199          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.544e-20
Identity = 71/213 (33.33%), Postives = 97/213 (45.54%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLD---DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAY--AAG-----DVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            GWR  MEDAH A   L    ++ SFF VYDGH G  VAK+C + L   +  N+ +  +AG     +V   ++  F  +DE M+         V+ +K                G D                      SGSTA   +I   H    N GDSR ++ R  + +  ++DHKP    EKERI  AGG +   RVNGSL ++RA+GD
Sbjct:   31 GWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFRGSAGAPSVENVKNGIRTGFLEIDEHMR---------VMSEK--------------KHGADR---------------------SGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGD 199          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20
Identity = 66/213 (30.99%), Postives = 101/213 (47.42%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDS----------TSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            G R++MEDA+    +  DS          ++F+GV+DGHGGK  A+F    + + +++++ + + ++   +  AF + D                                             AF E    D     SG+TA  AI+    L+VANAGD R V+SR+G+A  +SRDHKP    E+ RI  +GG +  G +NG LN+ARA+GD
Sbjct:   97 GSRSSMEDAYLCVDNFMDSFGLLNSEAGPSAFYGVFDGHGGKHAAEFACHHIPRYIVEDQEFPS-EINKVLSSAFLQTDT--------------------------------------------AFLEACSLD-GSLASGTTALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIEASGGHVFDGYLNGQLNVARALGD 263          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C09_ORYSJ (Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.912e-19
Identity = 77/210 (36.67%), Postives = 102/210 (48.57%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTS---FFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGP-HSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG---FIHAGRVNGSLNLARAIGD 609
            G R  MEDA +  PD   ++    F+GV+DGHG   VA  C   +H+ V                      +E  KG  G  E+A   D + K    ++G + +     S+D+P     ++ P   D AG    STA VA++    ++VANAGDSR VISR G    LS DHKPD   E ERI  AGG   +    RV G L ++RAIGD
Sbjct:  107 GRRREMEDAVSIRPDFLPASGKFHFYGVFDGHGCSHVATTCQDRMHEIVA---------------------EEHNKGASG--EVAPWRDVMEKSFARMDGEVGNRASTRSDDEPACPCEQQTPSRRDHAG----STAVVAVVSPTQVVVANAGDSRAVISRAGVPVALSVDHKPDRPDELERIEAAGGRVIYWDGARVLGVLAMSRAIGD 289          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.488e-19
Identity = 66/213 (30.99%), Postives = 98/213 (46.01%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDST----------SFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            G +  MED H    DL +            +F+GV+DGHGG   A F  K + + ++++ ++    V  +++ AF + D                                            + F +    D +   SG+TA  A I    LI+ANAGD R V+ R+G+A  LS+DHKP+  AEK RI K GG ++ G +NG L++ARAIGD
Sbjct:   92 GAKQFMEDEHICIDDLVNHLGAAIQCSSLGAFYGVFDGHGGTDAAHFVRKNILRFIVEDSSFPLC-VKKAIKSAFLKAD--------------------------------------------YEFADDSSLDIS---SGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIEKLGGVVYDGYLNGQLSVARAIGD 256          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.488e-19
Identity = 73/202 (36.14%), Postives = 99/202 (49.01%), Query Frame = 1
Query:   16 MEDAHAAYPDLDDSTS-FFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFI---HAGRVNGSLNLARAIGD 609
            M D     P L   TS FFGVYDGHGG  VA +C   +H         A  +    +++   R +     Q  W ++ V  D   K    ++G I  P  G S+    +    E         T GSTA VA++ ++H+IV+N GDSR V+ R   +  LS DHKPD E E  RI KAGG +      RV+G L ++R+IGD
Sbjct:  220 MGDHEGMSPSLPYLTSHFFGVYDGHGGAQVADYCHDRIHS--------ALAEEIERIKEELCRRNTGEGRQVQWEKVFV--DCYLKVDDEVKGKINRPVVGSSDRMVLEAVSPE---------TVGSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGGKVIQWQGARVSGVLAMSRSIGD 402          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 1.445e-18
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 1
Query:  376 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHA-GRVNGSLNLARAIGD 609
            G  SG+TA VA+IR   LIVANAGDSRCV+S  G+A ++S DHKP+ E E  RI  AGG +   GRVNG LNL+RAIGD
Sbjct:  321 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGD 399          

HSP 2 Score: 81.2629 bits (199), Expect = 4.352e-15
Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDK 261
            GWR +MEDAH   P+LD+ T+ F VYDGHGG+ VA +CAK+L   +   KAY  G +  ++Q AF  +D  +  +   +ELA +  +
Sbjct:   34 GWRVSMEDAHNCIPELDNETAMFSVYDGHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALQDAFLAIDAKLTTEEVIKELAQIAGR 120          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.445e-18
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 1
Query:  376 GPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHA-GRVNGSLNLARAIGD 609
            G  SG+TA VA+IR   LIVANAGDSRCV+S  G+A ++S DHKP+ E E  RI  AGG +   GRVNG LNL+RAIGD
Sbjct:  325 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGD 403          

HSP 2 Score: 79.7221 bits (195), Expect = 1.266e-14
Identity = 36/87 (41.38%), Postives = 53/87 (60.92%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDK 261
            GWR +MEDAH   P+LD  T+ F VYDGHGG+ VA +CAK+L   +   KAY  G +  +++ AF  +D  +  +   +ELA +  +
Sbjct:   34 GWRVSMEDAHNCIPELDSETAMFSVYDGHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGR 120          
The following BLAST results are available for this feature:
BLAST of GO241595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PP2C3_YEAST1.182e-2031.75Protein phosphatase 2C homolog 3 OS=Saccharomyces ... [more]
PPM1A_RAT1.544e-2033.33Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm... [more]
PPM1A_RABIT1.544e-2033.33Protein phosphatase 1A OS=Oryctolagus cuniculus GN... [more]
PPM1A_MOUSE1.544e-2033.33Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE... [more]
P2C22_ARATH4.493e-2030.99Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
P2C09_ORYSJ2.912e-1936.67Probable protein phosphatase 2C 9 OS=Oryza sativa ... [more]
P2C27_ARATH6.488e-1930.99Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
P2C07_ARATH6.488e-1936.14Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
PPM1G_MOUSE1.445e-1862.03Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]
PPM1G_MACFA1.445e-1862.03Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]

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Properties
Property NameValue
Genbank description243 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 362 5, mRNA sequence.