GO241483

Overview
NameGO241483
Unique NameGO241483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.376e-29
Identity = 67/129 (51.94%), Postives = 80/129 (62.02%), Query Frame = 3
Query:  102 RRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEE--KND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            R  NV DP S+D W   D F +       S A       N R+DWKETP AHVF ADLPG+R          G +L ISGER++E++   KND +WH VERSSGKF RRFRLP  A+V+QV ASM+NGV
Sbjct:    5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGV 128          

HSP 2 Score: 26.5646 bits (57), Expect = 3.376e-29
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  481 LTVTVPKQEEKKP 519
            LTVTVPK+E KKP
Sbjct:  129 LTVTVPKEETKKP 141          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.281e-24
Identity = 56/130 (43.08%), Postives = 81/130 (62.31%), Query Frame = 3
Query:   96 GGRRTNVFDPFSLDVWDPF-DGFLSSALTNAPSSARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            GG      +P S+D+ +PF D    +A   APS+A   +   + A +DWKET  AHVF AD+PG+R           ++L+ISG+R++  EEK ++WHRVERSS +F+R  RLP NA  + V A+++NGV
Sbjct:   26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGV 155          

HSP 2 Score: 23.0978 bits (48), Expect = 1.281e-24
Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  481 LTVTVPKQEEKKP 519
            LT+T+PK  ++KP
Sbjct:  156 LTITIPKDNDRKP 168          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.822e-23
Identity = 48/86 (55.81%), Postives = 61/86 (70.93%), Query Frame = 3
Query:  222 ARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            AR+DWKETP+ HV   D+PGL+           R+L++SGER KE+E+K D WHRVERS GKF R+FRLP N  ++ VKA +ENGV
Sbjct:   67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGV 152          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.822e-23
Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 3
Query:  216 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            ++AR+DWKETP+ HV   D+PGL+           R+L++SGER KE+++K D WHRVERS GKF R+F+LP N  ++ VKA MENGV
Sbjct:   73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGV 160          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.078e-22
Identity = 48/95 (50.53%), Postives = 65/95 (68.42%), Query Frame = 3
Query:  198 RETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            R+TS   + AR+DWKET + H    D+PGL+            +L++SGER +E+E+K D+WHRVERS GKF R+F+LPDN  +E VKA +ENGV
Sbjct:   62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGV 156          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.600e-21
Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = 3
Query:  324 ILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            ILQISGER+ E+E+KND WHRVERSSGKF+R FRLPDNAKV+QVKASMENGV
Sbjct:    1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGV 52          

HSP 2 Score: 25.7942 bits (55), Expect = 1.600e-21
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  481 LTVTVPKQEEKKP 519
            LTVTVPK+E KKP
Sbjct:   53 LTVTVPKEEIKKP 65          

HSP 3 Score: 22.7126 bits (47), Expect = 1.600e-21
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  512 RNPEVKAIEISG 547
            + P+VKAIEISG
Sbjct:   63 KKPDVKAIEISG 74          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.110e-19
Identity = 52/123 (42.28%), Postives = 76/123 (61.79%), Query Frame = 3
Query:  114 VFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            +FD  + D W+PF  F ++   +A   A +TS FAN  I+ +ET +A+VF+ADLP G++          G +L I+GERS  +EEK  + H +ERS   F  RF LPD+A V+ V+ASM+ G+
Sbjct:    6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGM 127          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.947e-17
Identity = 43/97 (44.33%), Postives = 62/97 (63.92%), Query Frame = 3
Query:  201 ETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQ--EEKN--DKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            + +  + AR+DW+ET  AH    D+PG+R           R+L+ISGER +E+  E+K   D WHR ERS G+F R+ RLPDNA ++ + AS++NGV
Sbjct:   69 DVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGV 165          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.558e-16
Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 3
Query:  183 APSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXG-RILQISGER-----SKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            A ++A E +  A AR DWKETP+AHV   D+PG+R            R+L++SGER     ++E+E + D  +WHR ER++G+F RRFR+P  A V +V A +++GV
Sbjct:   59 AAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGV 165          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.084e-14
Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 3
Query:  216 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSS-----GKFLRRFRLPDNAKVEQVKASMENGV 479
            + A IDW E+  +H+FK ++PG            G +L I GE  KE++++N  WH  ER +      +FLRR  LP+N KV+QVKA +ENGV
Sbjct:   20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKENLVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGV 112          
The following BLAST results are available for this feature:
BLAST of GO241483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
HS166_ORYSJ3.376e-2951.9416.6 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS189_ORYSJ1.281e-2443.0818.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP41_SOYBN2.822e-2355.8122.0 kDa class IV heat shock protein OS=Glycine ma... [more]
HSP41_PEA2.822e-2353.4122.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HSP22_ARATH9.078e-2250.5322.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HSP12_SOYBN1.600e-2184.62Class I heat shock protein (Fragment) OS=Glycine m... [more]
HS17B_ORYSJ1.110e-1942.2817.9 kDa heat shock protein 2 OS=Oryza sativa subs... [more]
HS232_ORYSJ3.947e-1744.3323.2 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS219_ORYSJ2.558e-1642.9921.9 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS157_ARATH4.084e-1441.9415.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]

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Properties
Property NameValue
Genbank description131 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 228 5, mRNA sequence.