GO241483

Overview
NameGO241483
Unique NameGO241483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.967e-14
Identity = 40/102 (39.22%), Postives = 59/102 (57.84%), Query Frame = 3
Query:  180 NAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            NAPS    R+    A    D KE P ++VF  D+PGL+            +L ISGER +E+E++  K+ R+ER  GKF+R+F LP+NA  + + A  ++GV
Sbjct:   30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGV 131          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13
Identity = 47/121 (38.84%), Postives = 63/121 (52.07%), Query Frame = 3
Query:  132 LDVWDPFDGFLSSALTNAPSSA-----RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            LDV D   G      T +  SA     R+    A    D KE P A+ F  D+PGL            R+L +SGER +E+ E + K+ R+ER  GKF+R+F LPDNA V++V A   +GV
Sbjct:   20 LDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDDAKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGV 140          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12
Identity = 37/102 (36.27%), Postives = 59/102 (57.84%), Query Frame = 3
Query:  180 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            NAP+    R+    A    D KE P ++VF  D+PG++            +L ISGER +E+E++  K+ ++ER  GK +R+F LP+NA +E + A  ++GV
Sbjct:   27 NAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGV 128          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12
Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 3
Query:  153 DGFLSSALTNAP--SSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            DG   +   NAP  S  R+    A    D KE P ++VF+ D+PGL+            +L I GER +++E++  K+ R+ER  GK +R+F LP+NA  + + A  ++GV
Sbjct:   25 DGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGV 135          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.823e-12
Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 3
Query:  180 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            + PS A  R+    A    D KE P ++VF  D+PGL+            +L ISG+R++E+E++  K+ R+ER  GKF+++F LP++A  +++ A  ++GV
Sbjct:   35 SGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGV 136          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.823e-12
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  177 TNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSK----EQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            T  P+ A  R+    A    D K+ P A+ F  D+PGL+           R+L ISGER +    E++E++ K+ R+ER  GKF+R+F LPDNA V+++ A  ++GV
Sbjct:   36 TGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGV 142          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: SP21_STIAU (Spore protein SP21 OS=Stigmatella aurantiaca GN=hspA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.993e-12
Identity = 44/131 (33.59%), Postives = 70/131 (53.44%), Query Frame = 3
Query:  102 RRTNVFDPFS----LDVWDPFDGFLSSALTNAPSSARETSQFANA-RIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            +RT  +DPF     L  WDPF+      L N P  A      A     + +ET +A++FKADLPG+            R+  +SG+R +E+ E++++++  ER+ G F R F LP+    + V+A ++NGV
Sbjct:   15 QRTREWDPFQQMQELMNWDPFE------LANHPWFANRQGPPAFVPAFEVRETKEAYIFKADLPGVDEKDIEVTLTGDRV-SVSGKREREKREESERFYAYERTFGSFSRAFTLPEGVDGDNVRADLKNGV 138          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.993e-12
Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 3
Query:  198 RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKND--KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            R+    A    D KE P ++VF AD+PG++            +L +SGER++ ++++ D  K+ R+ER  GKF+R+F LP+NA VE + A  ++GV
Sbjct:   48 RDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGV 143          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.891e-12
Identity = 39/107 (36.45%), Postives = 59/107 (55.14%), Query Frame = 3
Query:  216 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQI--------------SGERSKEQEEKND--KWHRVERSSGK---FLRRFRLPDNAKVEQVKASMENGV 479
            A   +DW+ETP AHVF+ DLPGL           G IL++              +G+ S E+EE+ND  +WH  ER++G+    + +FRLP++A  ++  A M +GV
Sbjct:   25 ARPPMDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGV 131          

HSP 2 Score: 21.557 bits (44), Expect = 9.891e-12
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1
Query:  481 LTVTVPKQEEKK 516
            LTVTVPK++ KK
Sbjct:  132 LTVTVPKRKGKK 143          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 3
Query:  180 NAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            N PS A  R+    A    D  E P A+VF  D+PG++            +L +SG+R ++ +E    K+ R+ER  GKF+R+F+LPDNA +E++ A+  +GV
Sbjct:   30 NNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGV 132          
The following BLAST results are available for this feature:
BLAST of GO241483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
HSP21_SOLPE6.967e-1439.2217.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP22_MAIZE4.516e-1338.8417.8 kDa class II heat shock protein OS=Zea mays P... [more]
HSP21_PEA1.716e-1236.2717.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_SOYBN2.241e-1235.1417.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP21_HELAN3.823e-1235.2917.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP18_ORYSJ3.823e-1238.3218.0 kDa class II heat shock protein OS=Oryza sati... [more]
SP21_STIAU4.993e-1233.59Spore protein SP21 OS=Stigmatella aurantiaca GN=hs... [more]
HSP22_IPONI4.993e-1237.5018.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HS178_ORYSJ9.891e-1236.4517.8 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HS177_ARATH1.112e-1136.8917.7 kDa class II heat shock protein OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank description131 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 228 5, mRNA sequence.