GO241473

Overview
NameGO241473
Unique NameGO241473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_NEMVE (40S ribosomal protein S3a OS=Nematostella vectensis GN=v1g242621 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.046e-34
Identity = 77/125 (61.60%), Postives = 93/125 (74.40%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQDH**LHIXGCSALGFTKRLPNQVK 591
            DWYD+KAPS F +R +GKT+VTRT GTKIAS+GLK  VFEVSL DL N +E A+RK +L  E+VQG+N LTNF GMN TTDKLRSLV+KW TLIEA V  +     ++     +GFTKR  NQ+K
Sbjct:   28 DWYDVKAPSMFNIRQIGKTVVTRTAGTKIASDGLKGRVFEVSLADLQN-DEIAFRKFKLMCEEVQGRNCLTNFHGMNMTTDKLRSLVKKWQTLIEAAVDVKTT-DGYLLRMFCIGFTKRRQNQIK 150          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_POSPM (40S ribosomal protein S1 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.366e-34
Identity = 75/125 (60.00%), Postives = 94/125 (75.20%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQDH**LHIXGCSALGFTKRLPNQVK 591
            DWYDIKAPS F  RNVGKTLV R+ G K A++ LK  + E+SL DL N+EE A+RKI+LR ++VQGKN LTNF GM+F++DKLRSLVRKW TLIEA+V  +     ++    A+GFTKR P QV+
Sbjct:   28 DWYDIKAPSIFEKRNVGKTLVNRSSGLKNANDSLKGRIVEISLADLNNDEEQAFRKIKLRIDEVQGKNCLTNFHGMSFSSDKLRSLVRKWQTLIEAHVDVKTT-DGYLLRLFAIGFTKRRPTQVR 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_COPC7 (40S ribosomal protein S1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.366e-34
Identity = 73/125 (58.40%), Postives = 94/125 (75.20%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQDH**LHIXGCSALGFTKRLPNQVK 591
            DWYDIKAPS F  RNVGKTLV R+QG K A++ L+  + EVSL DL  +EE ++RKI+LR +++QG+N LTNF GM+FT+DKLRSLVRKW TL+EA+V  +     ++    A+GFTKR P QVK
Sbjct:   28 DWYDIKAPSIFETRNVGKTLVNRSQGLKNANDSLRGRIIEVSLADLNKDEEQSFRKIKLRVDEIQGRNCLTNFHGMDFTSDKLRSLVRKWQTLVEAHVDVKTT-DGYLLRLFAIGFTKRRPTQVK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_PYRTR (40S ribosomal protein S1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=rps1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.043e-34
Identity = 75/127 (59.06%), Postives = 93/127 (73.23%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEA--YVGCQDH**LHIXGCSALGFTKRLPNQVK 591
            DWY+IKAP  F VR+VGKTLV RT G K A++ LK  +FEVSL DL  +E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA   V   D    ++     + FTKR PNQVK
Sbjct:   27 DWYNIKAPGTFAVRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVVVKTTDD---YLLRLFCIAFTKRRPNQVK 150          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_NEOFI (40S ribosomal protein S1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rps1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.043e-34
Identity = 74/127 (58.27%), Postives = 96/127 (75.59%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F++R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FTTDKLRSLVRKW +LIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_CANDC (40S ribosomal protein S1 OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.043e-34
Identity = 72/125 (57.60%), Postives = 94/125 (75.20%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQDH**LHIXGCSALGFTKRLPNQVK 591
            DW+DIKAP+ F  RNVGKTL+ R+ G K A++GLK  VFEV L DL   E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V  +     ++    A+ FTKR PNQ+K
Sbjct:   28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTS-DDYVLRVFAIAFTKRQPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_CANAW (40S ribosomal protein S1 OS=Candida albicans (strain WO-1) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.043e-34
Identity = 72/125 (57.60%), Postives = 94/125 (75.20%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQDH**LHIXGCSALGFTKRLPNQVK 591
            DW+DIKAP+ F  RNVGKTL+ R+ G K A++GLK  VFEV L DL   E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V  +     ++    A+ FTKR PNQ+K
Sbjct:   28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTS-DDYVLRVFAIAFTKRQPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_CANAL (40S ribosomal protein S1 OS=Candida albicans GN=RPS1 PE=3 SV=3)

HSP 1 Score: 144.821 bits (364), Expect = 3.043e-34
Identity = 72/125 (57.60%), Postives = 94/125 (75.20%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQDH**LHIXGCSALGFTKRLPNQVK 591
            DW+DIKAP+ F  RNVGKTL+ R+ G K A++GLK  VFEV L DL   E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V  +     ++    A+ FTKR PNQ+K
Sbjct:   28 DWFDIKAPTTFENRNVGKTLINRSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTS-DDYVLRVFAIAFTKRQPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_ASPFU (40S ribosomal protein S1 OS=Aspergillus fumigatus GN=rps1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.043e-34
Identity = 74/127 (58.27%), Postives = 96/127 (75.59%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F++R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FTTDKLRSLVRKW +LIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_ASPFC (40S ribosomal protein S1 OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=rps1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.043e-34
Identity = 74/127 (58.27%), Postives = 96/127 (75.59%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F++R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FTTDKLRSLVRKW +LIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
The following BLAST results are available for this feature:
BLAST of GO241473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
RS3A_NEMVE1.046e-3461.6040S ribosomal protein S3a OS=Nematostella vectensi... [more]
RS3A_POSPM1.366e-3460.0040S ribosomal protein S1 OS=Postia placenta (strai... [more]
RS3A_COPC71.366e-3458.4040S ribosomal protein S1 OS=Coprinopsis cinerea (s... [more]
RS3A_PYRTR3.043e-3459.0640S ribosomal protein S1 OS=Pyrenophora tritici-re... [more]
RS3A_NEOFI3.043e-3458.2740S ribosomal protein S1 OS=Neosartorya fischeri (... [more]
RS3A_CANDC3.043e-3457.6040S ribosomal protein S1 OS=Candida dubliniensis (... [more]
RS3A_CANAW3.043e-3457.6040S ribosomal protein S1 OS=Candida albicans (stra... [more]
RS3A_CANAL3.043e-3457.6040S ribosomal protein S1 OS=Candida albicans GN=RP... [more]
RS3A_ASPFU3.043e-3458.2740S ribosomal protein S1 OS=Aspergillus fumigatus ... [more]
RS3A_ASPFC3.043e-3458.2740S ribosomal protein S1 OS=Aspergillus fumigatus ... [more]

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Properties
Property NameValue
Genbank description121 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 212 5, mRNA sequence.