GO241473

Overview
NameGO241473
Unique NameGO241473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_NECH7 (40S ribosomal protein S1 OS=Nectria haematococca (strain 77-13-4 / FGSC 9596 / MPVI) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.975e-34
Identity = 75/127 (59.06%), Postives = 94/127 (74.02%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            DWY IKAP+ F VR+VGKTLV RT G K A++ LK  + EVSL DL  +E+HA+RK+RLR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DWYSIKAPNPFNVRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHAFRKVRLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDD---YLIRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_CHAGB (40S ribosomal protein S1 OS=Chaetomium globosum GN=RPS1 PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.975e-34
Identity = 74/127 (58.27%), Postives = 94/127 (74.02%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            DWY IKAP+ F +R+VGKTLV RT G K A++ LK  + EVSL DL  +E+H++RKI+LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V     DH   ++    A+ FTKR PNQ+K
Sbjct:   28 DWYGIKAPAPFAIRDVGKTLVNRTTGLKNANDALKGRIVEVSLADLQKDEDHSFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVMTTDH---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_ASPTN (40S ribosomal protein S1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=rps1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.975e-34
Identity = 73/127 (57.48%), Postives = 96/127 (75.59%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F++R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR +++QGKN LTNF G++FTTDKLRSLVRKW +LIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_ASPOR (40S ribosomal protein S1 OS=Aspergillus oryzae GN=rps1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.975e-34
Identity = 73/127 (57.48%), Postives = 96/127 (75.59%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F++R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR +++QGKN LTNF G++FTTDKLRSLVRKW +LIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_ASPFN (40S ribosomal protein S1 OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=rps1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.975e-34
Identity = 73/127 (57.48%), Postives = 96/127 (75.59%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F++R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR +++QGKN LTNF G++FTTDKLRSLVRKW +LIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_ASPCL (40S ribosomal protein S1 OS=Aspergillus clavatus GN=rps1 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.975e-34
Identity = 73/127 (57.48%), Postives = 96/127 (75.59%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F++R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR +++QGKN LTNF G++FTTDKLRSLVRKW +LIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFQIRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_PERAM (40S ribosomal protein S3a OS=Periplaneta americana GN=Parcxpwex01 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.191e-34
Identity = 72/100 (72.00%), Postives = 82/100 (82.00%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYV 510
            DWYD+KAPS F  R +GKTLV RTQGTKIASEGLK+ VFEVSL DL N+   E ++RK RL AEDVQG+NVLTNF GM+ TTDKLRS+V+KW TLIEA V
Sbjct:   29 DWYDVKAPSMFATRQIGKTLVNRTQGTKIASEGLKYRVFEVSLADLQNDNDAERSFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANV 128          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_NEUCR (40S ribosomal protein S1 OS=Neurospora crassa GN=crp-8 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.191e-34
Identity = 73/127 (57.48%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            DWY IKAP+ F VR+VGKTLV RT G K A++ LK  +FEVSL DL  +E+H++RK++LR +++QGKN LTNF G++FT+DKLRSLVRKW TLIEA +  +  D    ++    A+ FTKR PNQVK
Sbjct:   28 DWYGIKAPAPFNVRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQKDEDHSFRKVKLRVDEIQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANITVKTTDD---YLLRLFAIAFTKRRPNQVK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_AJECN (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.191e-34
Identity = 75/127 (59.06%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F VR+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFAVRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_AJECH (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain H143) GN=RPS1 PE=3 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 5.191e-34
Identity = 75/127 (59.06%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F VR+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFAVRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
The following BLAST results are available for this feature:
BLAST of GO241473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
RS3A_NECH73.975e-3459.0640S ribosomal protein S1 OS=Nectria haematococca (... [more]
RS3A_CHAGB3.975e-3458.2740S ribosomal protein S1 OS=Chaetomium globosum GN... [more]
RS3A_ASPTN3.975e-3457.4840S ribosomal protein S1 OS=Aspergillus terreus (s... [more]
RS3A_ASPOR3.975e-3457.4840S ribosomal protein S1 OS=Aspergillus oryzae GN=... [more]
RS3A_ASPFN3.975e-3457.4840S ribosomal protein S1 OS=Aspergillus flavus (st... [more]
RS3A_ASPCL3.975e-3457.4840S ribosomal protein S1 OS=Aspergillus clavatus G... [more]
RS3A_PERAM5.191e-3472.0040S ribosomal protein S3a OS=Periplaneta americana... [more]
RS3A_NEUCR5.191e-3457.4840S ribosomal protein S1 OS=Neurospora crassa GN=c... [more]
RS3A_AJECN5.191e-3459.0640S ribosomal protein S1 OS=Ajellomyces capsulata ... [more]
RS3A_AJECH5.191e-3459.0640S ribosomal protein S1 OS=Ajellomyces capsulata ... [more]

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Properties
Property NameValue
Genbank description121 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 212 5, mRNA sequence.