GO241473

Overview
NameGO241473
Unique NameGO241473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_AJECG (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.191e-34
Identity = 75/127 (59.06%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F VR+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFAVRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_SCLS1 (40S ribosomal protein S1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rps1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.780e-34
Identity = 72/127 (56.69%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            DWY IKAPS F++R+VGKTLV RT G K A++ LK  + EVSL DL  +E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW +LIEA +  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DWYQIKAPSSFQIRDVGKTLVNRTTGLKNANDSLKGRIIEVSLADLQKDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANITVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_PARBP (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain Pb03) GN=RPS1 PE=3 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 6.780e-34
Identity = 74/127 (58.27%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F +R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_PARBD (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain Pb18) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.780e-34
Identity = 74/127 (58.27%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F +R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_PARBA (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.780e-34
Identity = 74/127 (58.27%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F +R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDALKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_AJEDS (40S ribosomal protein S1 OS=Ajellomyces dermatitidis (strain SLH14081) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.780e-34
Identity = 74/127 (58.27%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F +R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_AJEDR (40S ribosomal protein S1 OS=Ajellomyces dermatitidis (strain ER-3) GN=RPS1 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.780e-34
Identity = 74/127 (58.27%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F +R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_BOTFB (40S ribosomal protein S1 OS=Botryotinia fuckeliana (strain B05.10) GN=rps1 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 8.855e-34
Identity = 72/127 (56.69%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            DWY IKAPS F++R+VGKTLV RT G K A++ LK  + EVSL DL  +E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW +LIEA +  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DWYQIKAPSSFQIRDVGKTLVNRTTGLKNANDSLKGRIVEVSLADLQKDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANITVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_ASPNC (40S ribosomal protein S1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rps1 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 8.855e-34
Identity = 73/127 (57.48%), Postives = 95/127 (74.80%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F+ R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR +++QGKN LTNF G++FTTDKLRSLVRKW +LIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFQTRDVGKTLVNRTSGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEIQGKNCLTNFHGLDFTTDKLRSLVRKWQSLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
BLAST of GO241473 vs. ExPASy Swiss-Prot
Match: RS3A_TALSN (40S ribosomal protein S1 OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=rps1 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.156e-33
Identity = 73/127 (57.48%), Postives = 96/127 (75.59%), Query Frame = 1
Query:  217 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHGVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVGCQ--DH**LHIXGCSALGFTKRLPNQVK 591
            D Y +KAPS F++R+VGKTLV RT G K A++ LK  +FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW +LIEA V  +  D    ++    A+ FTKR PNQ+K
Sbjct:   28 DEYSVKAPSTFQIRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDD---YLLRLFAIAFTKRRPNQIK 151          
The following BLAST results are available for this feature:
BLAST of GO241473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
RS3A_AJECG5.191e-3459.0640S ribosomal protein S1 OS=Ajellomyces capsulata ... [more]
RS3A_SCLS16.780e-3456.6940S ribosomal protein S1 OS=Sclerotinia sclerotior... [more]
RS3A_PARBP6.780e-3458.2740S ribosomal protein S1 OS=Paracoccidioides brasi... [more]
RS3A_PARBD6.780e-3458.2740S ribosomal protein S1 OS=Paracoccidioides brasi... [more]
RS3A_PARBA6.780e-3458.2740S ribosomal protein S1 OS=Paracoccidioides brasi... [more]
RS3A_AJEDS6.780e-3458.2740S ribosomal protein S1 OS=Ajellomyces dermatitid... [more]
RS3A_AJEDR6.780e-3458.2740S ribosomal protein S1 OS=Ajellomyces dermatitid... [more]
RS3A_BOTFB8.855e-3456.6940S ribosomal protein S1 OS=Botryotinia fuckeliana... [more]
RS3A_ASPNC8.855e-3457.4840S ribosomal protein S1 OS=Aspergillus niger (str... [more]
RS3A_TALSN1.156e-3357.4840S ribosomal protein S1 OS=Talaromyces stipitatus... [more]

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Properties
Property NameValue
Genbank description121 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 212 5, mRNA sequence.