GO241472

Overview
NameGO241472
Unique NameGO241472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241472 vs. ExPASy Swiss-Prot
Match: HINT1_HUMAN (Histidine triad nucleotide-binding protein 1 OS=Homo sapiens GN=HINT1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 8.232e-17
Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 1
Query:  265 TIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLL 456
            TIF KII KEIP+ I++ED++ LAF DI+PQAP H L+IPK    ++ ++ AE     +LGHL+
Sbjct:   17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPK--KHISQISVAEDDDESLLGHLM 78          

HSP 2 Score: 39.2762 bits (90), Expect = 8.232e-17
Identity = 16/28 (57.14%), Postives = 21/28 (75.00%), Query Frame = 3
Query:  486 GILDGFRVVINNGPGACQSVYHLHLHVL 569
            G+  G+R+V+N G    QSVYH+HLHVL
Sbjct:   89 GLNKGYRMVVNEGSDGGQSVYHVHLHVL 116          
BLAST of GO241472 vs. ExPASy Swiss-Prot
Match: HINT_SHIFL (HIT-like protein hinT OS=Shigella flexneri GN=hinT PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.087e-16
Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 1
Query:  265 TIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLL 456
            TIF KII +EIPS IVY+D+ V AFRDI+PQAP H+LIIP     + T+    A H   LG ++
Sbjct:    5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMI 66          

HSP 2 Score: 38.5058 bits (88), Expect = 1.087e-16
Identity = 16/34 (47.06%), Postives = 25/34 (73.53%), Query Frame = 3
Query:  471 VAEKEGIL-DGFRVVINNGPGACQSVYHLHLHVL 569
            +AE+EGI  DG+R+++N      Q VYH+H+H+L
Sbjct:   72 IAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLL 105          
BLAST of GO241472 vs. ExPASy Swiss-Prot
Match: HINT_ECOLI (HIT-like protein hinT OS=Escherichia coli (strain K12) GN=hinT PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.087e-16
Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 1
Query:  265 TIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLL 456
            TIF KII +EIPS IVY+D+ V AFRDI+PQAP H+LIIP     + T+    A H   LG ++
Sbjct:    5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMI 66          

HSP 2 Score: 38.5058 bits (88), Expect = 1.087e-16
Identity = 16/34 (47.06%), Postives = 25/34 (73.53%), Query Frame = 3
Query:  471 VAEKEGIL-DGFRVVINNGPGACQSVYHLHLHVL 569
            +AE+EGI  DG+R+++N      Q VYH+H+H+L
Sbjct:   72 IAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLL 105          
BLAST of GO241472 vs. ExPASy Swiss-Prot
Match: HINT_ECO57 (HIT-like protein hinT OS=Escherichia coli O157:H7 GN=hinT PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.087e-16
Identity = 34/64 (53.12%), Postives = 43/64 (67.19%), Query Frame = 1
Query:  265 TIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLL 456
            TIF KII +EIPS IVY+D+ V AFRDI+PQAP H+LIIP     + T+    A H   LG ++
Sbjct:    5 TIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNIL--IPTVNDVSAEHEQALGRMI 66          

HSP 2 Score: 38.5058 bits (88), Expect = 1.087e-16
Identity = 16/34 (47.06%), Postives = 25/34 (73.53%), Query Frame = 3
Query:  471 VAEKEGIL-DGFRVVINNGPGACQSVYHLHLHVL 569
            +AE+EGI  DG+R+++N      Q VYH+H+H+L
Sbjct:   72 IAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLL 105          
BLAST of GO241472 vs. ExPASy Swiss-Prot
Match: HINT1_RAT (Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus GN=Hint1 PE=1 SV=5)

HSP 1 Score: 67.0106 bits (162), Expect = 1.392e-16
Identity = 32/64 (50.00%), Postives = 46/64 (71.88%), Query Frame = 1
Query:  265 TIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLL 456
            TIF KII KEIP+ I++ED++ LAF DI+PQAP H L+IPK    ++ ++ A+     +LGHL+
Sbjct:   17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPK--KHISQISVADDDDESLLGHLM 78          

HSP 2 Score: 39.6614 bits (91), Expect = 1.392e-16
Identity = 16/28 (57.14%), Postives = 21/28 (75.00%), Query Frame = 3
Query:  486 GILDGFRVVINNGPGACQSVYHLHLHVL 569
            G+  G+R+V+N G    QSVYH+HLHVL
Sbjct:   89 GLKRGYRMVVNEGADGGQSVYHIHLHVL 116          
BLAST of GO241472 vs. ExPASy Swiss-Prot
Match: HINT1_MOUSE (Histidine triad nucleotide-binding protein 1 OS=Mus musculus GN=Hint1 PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 1.392e-16
Identity = 32/64 (50.00%), Postives = 46/64 (71.88%), Query Frame = 1
Query:  265 TIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLL 456
            TIF KII KEIP+ I++ED++ LAF DI+PQAP H L+IPK    ++ ++ A+     +LGHL+
Sbjct:   17 TIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPK--KHISQISVADDDDESLLGHLM 78          

HSP 2 Score: 39.6614 bits (91), Expect = 1.392e-16
Identity = 16/28 (57.14%), Postives = 21/28 (75.00%), Query Frame = 3
Query:  486 GILDGFRVVINNGPGACQSVYHLHLHVL 569
            G+  G+R+V+N G    QSVYH+HLHVL
Sbjct:   89 GLKRGYRMVVNEGADGGQSVYHIHLHVL 116          
BLAST of GO241472 vs. ExPASy Swiss-Prot
Match: HITA_NEIGO (Protein hitA OS=Neisseria gonorrhoeae GN=hitA PE=4 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.859e-16
Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 1
Query:  268 IFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLL 456
            IF KI AKEIP+  VYED +++ F+DINP AP+H+L+IPK      +LA A   H  +LG ++
Sbjct:    5 IFCKIAAKEIPAQTVYEDGEMVCFKDINPAAPLHLLLIPKVH--FDSLAHAAPEHQPLLGKMM 65          

HSP 2 Score: 43.5134 bits (101), Expect = 1.859e-16
Identity = 17/42 (40.48%), Postives = 27/42 (64.29%), Query Frame = 3
Query:  444 GPSSVCVKIVAEKEGILDGFRVVINNGPGACQSVYHLHLHVL 569
            G   + V  +A+  G+ DGF+ +IN G G  Q V+HLH+H++
Sbjct:   62 GKMMLKVPEIAKASGLTDGFKTLINTGKGGGQEVFHLHIHIM 103          
BLAST of GO241472 vs. ExPASy Swiss-Prot
Match: YHIT_AQUAE (Uncharacterized HIT-like protein aq_141 OS=Aquifex aeolicus GN=aq_141 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.051e-14
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 1
Query:  268 IFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFR-DGLTTLAKAEARHGDILGHL 453
            IF KI+  E+P+  VYED+KVLAF DINP APVH+LIIPK    G+ TL   E     ++GH+
Sbjct:    7 IFCKIVRGEVPAKKVYEDDKVLAFHDINPVAPVHILIIPKKHIMGIQTL---EPEDECLVGHM 66          

HSP 2 Score: 37.7354 bits (86), Expect = 2.051e-14
Identity = 16/33 (48.48%), Postives = 23/33 (69.70%), Query Frame = 3
Query:  471 VAEKEGILDGFRVVINNGPGACQSVYHLHLHVL 569
            +A  E +  G+R+V N G  A QSV+HLHLH++
Sbjct:   79 IAPDENLNKGYRLVFNVGKDAGQSVFHLHLHLI 111          
BLAST of GO241472 vs. ExPASy Swiss-Prot
Match: Y961_HAEIN (HIT-like protein HI0961 OS=Haemophilus influenzae GN=HI0961 PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 7.760e-14
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 1
Query:  265 TIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIP 384
            TIF KII KEIP++IVY+DE V AFRDI+PQA  H+LIIP
Sbjct:    5 TIFSKIIRKEIPANIVYQDELVTAFRDISPQAKTHILIIP 44          

HSP 2 Score: 35.039 bits (79), Expect = 7.760e-14
Identity = 14/39 (35.90%), Postives = 24/39 (61.54%), Query Frame = 3
Query:  453 SVCVKIVAEKEGILDGFRVVINNGPGACQSVYHLHLHVL 569
            SV  K+  E+    DG+R+++N      Q V+HLH+H++
Sbjct:   67 SVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLV 105          
BLAST of GO241472 vs. ExPASy Swiss-Prot
Match: Y1390_SYNE7 (Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_1390 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.281e-14
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 1
Query:  265 TIFDKIIAKEIPSSIVYEDEKVLAFRDINPQAPVHVLIIPKFRDGLTTLAKAEARHGDILGHLL 456
            TIF KII +EIP+ IVYED+  LAFRD+ PQAPVH+L+IPK    +  L +A A H  +LGHLL
Sbjct:    5 TIFGKIIRREIPADIVYEDDLCLAFRDVAPQAPVHILVIPK--QPIANLLEATAEHQALLGHLL 66          
The following BLAST results are available for this feature:
BLAST of GO241472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
HINT1_HUMAN8.232e-1751.56Histidine triad nucleotide-binding protein 1 OS=Ho... [more]
HINT_SHIFL1.087e-1653.13HIT-like protein hinT OS=Shigella flexneri GN=hinT... [more]
HINT_ECOLI1.087e-1653.13HIT-like protein hinT OS=Escherichia coli (strain ... [more]
HINT_ECO571.087e-1653.13HIT-like protein hinT OS=Escherichia coli O157:H7 ... [more]
HINT1_RAT1.392e-1650.00Histidine triad nucleotide-binding protein 1 OS=Ra... [more]
HINT1_MOUSE1.392e-1650.00Histidine triad nucleotide-binding protein 1 OS=Mu... [more]
HITA_NEIGO1.859e-1649.21Protein hitA OS=Neisseria gonorrhoeae GN=hitA PE=4... [more]
YHIT_AQUAE2.051e-1453.97Uncharacterized HIT-like protein aq_141 OS=Aquifex... [more]
Y961_HAEIN7.760e-1472.50HIT-like protein HI0961 OS=Haemophilus influenzae ... [more]
Y1390_SYNE79.281e-1459.38Uncharacterized HIT-like protein Synpcc7942_1390 O... [more]

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Properties
Property NameValue
Genbank description120 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 210 5, mRNA sequence.