GO241463

Overview
NameGO241463
Unique NameGO241463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: LCYB_SYNE7 (Lycopene beta cyclase OS=Synechococcus elongatus (strain PCC 7942) GN=crtL PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.555e-35
Identity = 78/211 (36.97%), Postives = 115/211 (54.50%), Query Frame = -3
Query:    6 YGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTL 638
            YG  +R  L+   L++C   G+++   K   + H+   S +    G  +QA +V+D TG     +Q        YQ AYGI+ +  + P +  + V MD+R  HL+      E     PTFLYAM   ++  F+EETSL A P +P   +++R+  RL   G+ V+ I+ +E+C+ PM  PLP L Q VVG GG A MVHP++GYMV   L
Sbjct:   81 YGLFDRAQLQQHWLRQCEQGGLQWQLGKAAAIAHDSHHSCVTTAAGQELQARLVVDTTGHQAAFIQRPHSDAIAYQAAYGIIGQFSQPPIEPHQFVLMDYRSDHLS-----PEERQLPPTFLYAMDLGNDVYFVEETSLAACPAIPYDRLKQRLYQRLATRGVTVQVIQHEEYCLFPMNLPLPDLTQSVVGFGGAASMVHPASGYMVGALL 286          
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: Y801_DEIRA (Uncharacterized carotenoid cyclase DR_0801 OS=Deinococcus radiodurans GN=DR_0801 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.467e-18
Identity = 58/163 (35.58%), Postives = 80/163 (49.08%), Query Frame = -3
Query:    3 QAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 491
            Q  +V+DA+G    +     P     Q AYG++A     P     MV+MD+R        ELK   +   TFLYAM    +R F+EETSL+ARP     +++ R++ARL   G      E +E    PM    P  P  V+  G  AG VHP +G+ VA  L+
Sbjct:  132 QTRLVVDASGHGALVSPVRFPGGAALQTAYGVVARFRRPPVTPGSMVWMDYRTPA----PELKRGEA---TFLYAMHLGGDRYFVEETSLIARPAPTRAELRRRLLARLSAQGTPPHATESEEWVAFPMNAQAPA-PGGVLAYGAAAGRVHPVSGFQVAGALS 286          
The following BLAST results are available for this feature:
BLAST of GO241463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
LCYB_SYNE76.555e-3536.97Lycopene beta cyclase OS=Synechococcus elongatus (... [more]
Y801_DEIRA1.467e-1835.58Uncharacterized carotenoid cyclase DR_0801 OS=Dein... [more]

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Properties
Property NameValue
Genbank description111 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone b6 5, mRNA sequence.