GO241397
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.342e-34 Identity = 60/79 (75.95%), Postives = 63/79 (79.75%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPG 356 D LYPGG FDPLGLADDP+ FAELKVKEIKNGRLAMFS GFFVQAIV GKGP+ NL D LADP N A+A A F PG Sbjct: 174 DTLYPGGPFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252 HSP 2 Score: 43.1282 bits (100), Expect = 1.342e-34 Identity = 23/39 (58.97%), Postives = 24/39 (61.54%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGEXD 118 GN SLIHAQS +A A QVVLMG E Y GG G D Sbjct: 133 GNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLD 171
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.125e-34 Identity = 68/80 (85.00%), Postives = 73/80 (91.25%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPGK 359 D +YPGG+FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV GKGP+ NL D +ADPV NNAWA+A NFVPGK Sbjct: 186 DKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.625e-34 Identity = 66/80 (82.50%), Postives = 74/80 (92.50%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPGK 359 DPLYPGG+FDPLGLADDP++FAELKVKE+KNGRLAMFSMFGFFVQAIV GKGP+ NL D +ADPV NNAWA+A NFVPG+ Sbjct: 186 DPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265 HSP 2 Score: 67.0106 bits (162), Expect = 5.631e-11 Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGEXD*PIVPRWQL*SIGFG**PGGF 181 GNP+LIHAQS LA WA QVVLMG VEGY + GGPLGE P+ P +G P F Sbjct: 147 GNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSF 206
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 4.734e-34 Identity = 69/81 (85.19%), Postives = 71/81 (87.65%), Query Frame = 3 Query: 114 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPG 356 VTDP+YPGGSFDPLGLADDP+ FAELKVKEIKNGRLAMFSMFGFFVQAIV GKGPL NL D LADPV NNAWAYA PG Sbjct: 187 VTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTSPPG 267 HSP 2 Score: 74.7146 bits (182), Expect = 2.701e-13 Identity = 37/60 (61.67%), Postives = 40/60 (66.67%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGEXD*PIVPRWQL*SIGFG**PGGF 181 GNPSL+HAQS LA WACQVVLMG VEGY +AGGPLGE PI P +G P F Sbjct: 150 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTF 209
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.683e-24 Identity = 49/79 (62.03%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADP-VNNNAWAYAXNFVP 353 D LYPGG FDPLGLADDP+ F ELKVKEIKNGRLAM M GF+ QAIV G+GP+ N L DP +N A F P Sbjct: 43 DRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121 HSP 2 Score: 35.8094 bits (81), Expect = 1.683e-24 Identity = 21/37 (56.76%), Postives = 24/37 (64.86%), Query Frame = 2 Query: 11 SLIHAQSXLAXWACQVVLMGXVEGY---XIAGGPLGE 112 +LIHA+S LA A QV+LMG VEGY A G GE Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGE 40
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 7.839e-21 Identity = 48/68 (70.59%), Postives = 54/68 (79.41%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNN 323 D L+PGG FDPLGLA DPE A LKVKEIKNGRLAMF+M GFF+QA V G+GP+ NLA L+DP NN Sbjct: 198 DKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 2.438e-18 Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGE 112 GNP+L+HAQS LA WACQVVLMG VEGY + GGPLGE Sbjct: 146 GNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGE 182 HSP 2 Score: 44.2838 bits (103), Expect = 2.438e-18 Identity = 18/21 (85.71%), Postives = 20/21 (95.24%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAF 182 D LYPGG+FDPLGLA+DPEAF Sbjct: 185 DQLYPGGAFDPLGLAEDPEAF 205
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.642e-18 Identity = 43/69 (62.32%), Postives = 52/69 (75.36%), Query Frame = 3 Query: 120 DPLYPGGS-FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNN 323 DP YPGG F+PLG D ++ ELK+KEIKNGRLAM ++ G+F+QA+V G GP NL D LADPVNNN Sbjct: 197 DPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.171e-16 Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 3 Query: 120 DPLYPGGSF-DPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNN 323 +P YPGG F +PLG D ++ ELK+KE+KNGRLAM ++ G+F+Q +V G GP NL D +ADPVNNN Sbjct: 199 NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNN 267
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 5.814e-16 Identity = 42/66 (63.64%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 129 YPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVXGKGPLXNLADXLADPVNNN 323 YPGG+FDPLG + DP F ELK+KEIKNGRLAM + GF V Q+ G GPL NLA LADP +NN Sbjct: 167 YPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 232 The following BLAST results are available for this feature:
BLAST of GO241397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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