GO241370

Overview
NameGO241370
Unique NameGO241370
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_VIBC3 (3-ketoacyl-CoA thiolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=fadA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19
Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = 3
Query:   45 VDKDEGLE-KFDAAKLMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            +D DE +  +   A L +LRP F    G+VTAG +S +SDGA+A++++S  KA  LGL + A+I+  A A   P      P  A  KA+  AGL    +D  E+NEAF   ++   K   LL    ++VN +GG ++LGHPLGCSG R
Sbjct:  204 LDYDEVIRPETTVAGLAELRPVFDPANGTVTAGTSSALSDGASAMLVMSEQKAKALGLTIRARIKAMAVAGCDPSIMGYGPVPATHKALKRAGLTMQDMDVVELNEAFAAQSLPCAKDLGLLDMMDDKVNLNGGAIALGHPLGCSGTR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SERP5 (3-ketoacyl-CoA thiolase OS=Serratia proteamaculans (strain 568) GN=fadA PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19
Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = 3
Query:   81 AKLMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            A L  LRP+F    G+VTAG +S +SDGA+A++L+S  +A  LGL+  A+IR  A     P      P  A   A+  AGL    ID +E+NEAF    +  I +  LL    +++N +GG ++LGHPLGCSG+R
Sbjct:  217 ASLAALRPAFDPVNGTVTAGTSSALSDGASAMLLMSESRAKALGLKARARIRSMAVVGCDPSIMGYGPVPASKLALKRAGLSVQDIDLFELNEAFAAQSLPCIKDLGLLDSIDDKINLNGGAIALGHPLGCSGSR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_VIBCH (3-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.049e-19
Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = 3
Query:   45 VDKDEGLE-KFDAAKLMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQK---LLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            +D DE +  +   A L +LRP F    G+VTAG +S +SDGA+A++++S  KA  LGL + A+I+  A A   P      P  A  KA+  AGL    +D  E+NEAF   ++   K   LL    ++VN +GG ++LGHPLGCSG R
Sbjct:  204 LDYDEVIRPETTVAGLAELRPVFDPANGTVTAGTSSALSDGASAMLVMSEQKAKALGLTIRARIKAMAVAGCDPSIMGYGPVPATHKALQRAGLTMQDMDVVELNEAFAAQSLPCAKDLGLLEMMDDKVNLNGGAIALGHPLGCSGTR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHEDO (3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=fadA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.049e-19
Identity = 58/133 (43.61%), Postives = 78/133 (58.65%), Query Frame = 3
Query:   87 LMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXD---PEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP F    G+VTAG +S +SDGA+A++++   KA  LGL + A+IR  A A          P  A  KA+A AGL    +D  E+NEAF   ++   K LG      E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LAGLRPVFDPANGTVTAGTSSALSDGASAMLVMEESKARALGLPIRARIRSMAVAGCDAAIMGYGPVPATQKALARAGLTVADLDVIELNEAFAAQSLPCVKDLGLQDVVEEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_KLEP7 (3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=fadA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.049e-19
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  L+P+F    G+VTAG +S +SDGAAA++L+S  +A ELGL+  A++R  A     P      P  A   A+  AGL    ID +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LSTLKPAFDPVTGTVTAGTSSALSDGAAAMLLMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSTSDIDVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_ESCF3 (3-ketoacyl-CoA thiolase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.049e-19
Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG++S +SDGAAA++++S  +A ELGL+  A++R  A     P      P  A   A+  AGL A  I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVSGTVTAGSSSALSDGAAAMLVMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_ACIAD (3-ketoacyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=fadA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.049e-19
Identity = 63/147 (42.86%), Postives = 83/147 (56.46%), Query Frame = 3
Query:   42 IVDKDEGLEKFDAAKLMKLRPSFK-EGGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLGXDPEQ--VNAHGGXVSLGHPLGCSGAR 473
            ++  D  LE F A     LRP F  +GG+VTA  +S +SDGA+A++L+S  +A  LGL+  A IR  A A          P  A  KA+  AGL    I   E+NEAF    ++  K LG   +Q  VN +GG ++LGHPLGCSGAR
Sbjct:  213 VIRPDANLEAFKA-----LRPVFDPKGGTVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSVADIQTVELNEAFAAQGLSVLKGLGLYEKQDIVNLNGGAIALGHPLGCSGAR 354          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHISS (3-ketoacyl-CoA thiolase OS=Shigella sonnei (strain Ss046) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.289e-19
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGAAA++++S  +A ELGL+  A++R  A     P      P  A   A+  AGL A  I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_SHEAM (3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.289e-19
Identity = 63/150 (42.00%), Postives = 85/150 (56.67%), Query Frame = 3
Query:   39 IIVDKDEGLE-KFDAAKLMKLRPSFKEG-GSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAFXVVAIANQKLLG---XDPEQVNAHGGXVSLGHPLGCSGAR 473
            I VD DE +  +     L  LRP F    G+VTAG +S +SDGAAA++++   KA  LGL + A++R  A A          P  A  KA+A AGL    +D  E+NEAF   ++   K LG      ++VN +GG ++LGHPLGCSGAR
Sbjct:  202 IKVDYDEVIRPETTLESLAGLRPVFDPANGTVTAGTSSALSDGAAAMLVMEEEKARALGLTIRARVRSMAVAGCDAAIMGYGPVPATQKALARAGLSIQDMDVIELNEAFAAQSLPCVKDLGLMDVVEDKVNLNGGAIALGHPLGCSGAR 351          
BLAST of GO241370 vs. ExPASy Swiss-Prot
Match: FADA_ECOUT (3-ketoacyl-CoA thiolase OS=Escherichia coli (strain UTI89 / UPEC) GN=fadA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.289e-19
Identity = 57/133 (42.86%), Postives = 80/133 (60.15%), Query Frame = 3
Query:   87 LMKLRPSFKE-GGSVTAGNASIISDGAAALVLVSGVKALELGLQVIAKIRGFADAAQAPEWXTTAPSLAILKAIANAGLEAXQIDYYEINEAF---XVVAIANQKLLGXDPEQVNAHGGXVSLGHPLGCSGAR 473
            L  LRP+F    G+VTAG +S +SDGAAA++++S  +A ELGL+  A++R  A     P      P  A   A+  AGL A  I  +E+NEAF    +  I +  L+    E++N +GG ++LGHPLGCSGAR
Sbjct:  219 LATLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARVRSMAVVGCDPSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINLNGGAIALGHPLGCSGAR 351          
The following BLAST results are available for this feature:
BLAST of GO241370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 273
Match NameE-valueIdentityDescription
FADA_VIBC33.100e-1941.223-ketoacyl-CoA thiolase OS=Vibrio cholerae serotyp... [more]
FADA_SERP53.100e-1942.223-ketoacyl-CoA thiolase OS=Serratia proteamaculans... [more]
FADA_VIBCH4.049e-1941.223-ketoacyl-CoA thiolase OS=Vibrio cholerae GN=fadA... [more]
FADA_SHEDO4.049e-1943.613-ketoacyl-CoA thiolase OS=Shewanella denitrifican... [more]
FADA_KLEP74.049e-1942.863-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae s... [more]
FADA_ESCF34.049e-1942.863-ketoacyl-CoA thiolase OS=Escherichia fergusonii ... [more]
FADA_ACIAD4.049e-1942.863-ketoacyl-CoA thiolase OS=Acinetobacter sp. (stra... [more]
FADA_SHISS5.289e-1942.863-ketoacyl-CoA thiolase OS=Shigella sonnei (strain... [more]
FADA_SHEAM5.289e-1942.003-ketoacyl-CoA thiolase OS=Shewanella amazonensis ... [more]
FADA_ECOUT5.289e-1942.863-ketoacyl-CoA thiolase OS=Escherichia coli (strai... [more]

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Properties
Property NameValue
Genbank description16 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 32 5, mRNA sequence.